Table 1.
Sequencing data and genetic loci summary statistics. All values (except percent missing data) rounded to nearest integer. Per individual statistics are summarized in Table S1
| Mean ± SD | Minimum | Maximum | |
|---|---|---|---|
| Sequence reads | 8,883,159 ± 2,858,211 | 3,769,666 | 20,314,656 |
| No. of locia | 508 ± 4 | 487 | 512 |
| Average locus lengtha | 716 ± 56 | 539 | 842 |
| Average reads per locusa | 2547 ± 595 | 1,029 | 4,781 |
| % Missing locia | 3.06 ± 0.76 | 2.29 | 7.06 |
| Average contig length (bp)b | 629 ± 70 | 336 | 887 |
| SNPs per locusb | 17 ± 8 | 3 | 56 |
| PI SNPs per locusb | 6 ± 4 | 0 | 26 |
PI, Parsimony Informative; SNP, single nucleotide polymorphism.
a
Summary statistics using each individual's reads and locus distribution information.
b
Statistics summarizing each contig locus used in phylogenetic analyses.