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. Author manuscript; available in PMC: 2016 Nov 14.
Published in final edited form as: Cancer Epidemiol Biomarkers Prev. 2011 May 24;20(7):1453–1462. doi: 10.1158/1055-9965.EPI-11-0042

Figure 1. Case-control association plot for lung adenocarcinoma, LD map and regional plot of the genomic structure of the TP63 region in chromosome 3q28.

Figure 1

−log10 P values (y-axis) of the SNPs are shown according to their chromosomal position (x-axis). The genotyped and imputed SNPs are labelled by diamonds and circles respectively. The colour intensity of each symbol reflects the extent of LD with rs17429138: black (r2>0.8) through to white (r2<0.2). Genetic recombination rates (cM/Mb), estimated using HapMap CEU samples, are shown with a light grey line. Physical positions are based on NCBI build 36 of the human genome. Also shown are the relative position of transcripts mapping to the region.