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. 2016 Aug 3;3(8):160235. doi: 10.1098/rsos.160235

Table 2.

A Bestiary of molecular replicators.

examples category notes
satellite tobacco mosaic virus satellite virus a satellite virus encodes its own coat protein but relies on Helper for other machinery
CMV Y-sat, cucumber mosaic virus (CMV) Y satellite RNA satellite RNAsubviral component a satellite nucleic acid like RNA [2224] uses Helper coat protein, may provide other non-protein machinery, e.g. siRNAs [25]
alphavirusesbetaviruses satellite DNAsubviral components nomenclature of newly discovered classes of replicators is in chaos, what needs/uses what/anything where/anywhere?
tobacco rattle virus comovirusesdianthoviruses multi-component viruses, genome components separately encapsidated‘coviruses’, for short contrast with influenza virus whose genome segments travel in same capsid original [26] shorter term, coviruses, almost [16] never usedvery common form of plant viruses
Sputnik [27] satellite virusvirophage virus of Mamavirus which infects amoebae
unnamed transpovironsprovirophage giant viruses such as mimivirus family and Pandoravirus are revealing a new bestiary of replicators [2]
sTRSV, tobacco ringspot virus viroidviroid-likevirusoidsatellite ‘s’ prefix generically ‘satellite’, various names reflecting knowledge of relatedness, contribution of any sort to Helper virus, known requirements for components, etc. [11]
P4, Enterobacteria phage P4 [28] satellite (bacterio)phage depends on P2 phage
Hepatitis D virus satellite RNAsubviral satelliteviroid-likemore? see [29]uses coat protein of Hepatitis B virus
pea enation mosaic virus ? insoluble ontological conundrum [30,31]
V-SINES retropositional parasitesnon-autonomous transposable element rather than being simply defective LINEs, V-SINEs may actively parasitize them [32]