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. 2016 Nov 15;6:37135. doi: 10.1038/srep37135

Figure 1. Alignment of LcIDLs with other plant IDA/IDL proteins.

Figure 1

(A) Alignment was made using the ClustalW2 program (http://www.ebi.ac.uk/Tools/clustalw2/) with manual adjustment using GeneDoc (http://www.psc.edu/biomed/genedoc/). The amino acid sequences of LcIDL1 (Litchi_GLEAN_10054315), LcIDL2 (Litchi_GLEAN_10027620), LcIDL3 (Litchi_GLEAN_10009234), AtIDA (At1g68765), AtIDL1 (AT3G25655), AtIDL2 (AT5G64667), AtIDL3 (AT5G09805), AtIDL4 (AT3G18715), AtIDL5 (AT1G76952), PtIDL1 (BU889756), ljIDL1(AW719486), ZmIDL1(BI430572), TaIDL1 (BM135459), SlIDAs and GmIDAs (see reference Tucker and Yang, 2012) were aligned. The conserved domains of signal peptide and PIP are marked with rectangles. (B) A sequence logo representation of the conserved C-terminal PIP domain of IDA/IDL peptides.