TABLE 1.
Number of DEGs found in ganglia after SVV infection
| dpi | Samplesa | Avg viral load ± SEMb | No. of DEGs |
|||
|---|---|---|---|---|---|---|
| Total | With human homologsc | Upregulated | Downregulated | |||
| 3 | DRG-L/S, DRG-C, DRG-T | 28 ± 6 | 393 | 324 | 137 | 187 |
| 7 | DRG-T, DRG-C | 26 ± 6 | 1,118 | 904 | 368 | 536 |
| 10 | DRG-C, TG | 17 ± 5 | 809 | 643 | 164 | 479 |
| 14 | TG, DRG-C, TG | 17 ± 9 | 576 | 512 | 51 | 461 |
| 100 | TG, TG | 39 ± 3 | 1100 | 839 | 203 | 636 |
a
Types of ganglia used for RNA-Seq analysis.
b
Average SVV genome copy number of all ganglia used in the RNA-Seq experiment per 1 μg DNA.
c
Number of rhesus macaque DEGs with human homologs used for enrichment analysis.