Table 2.
Top 20 differentially expressed long noncoding RNA genes between stromal and epithelial tissue
| Gene Name | Gene Biotype | Fold Change | FDR |
|---|---|---|---|
| Top 10 upregulated noncoding genes | |||
| FENDRR | lincRNA | 19.44 | 8.02E-31 |
| MEG3 | lincRNA | 10.95 | 4.70E-20 |
| RGS5 | antisense | 2.88 | 1.29E-16 |
| C14orf132 | lincRNA | 4.15 | 1.40E-13 |
| LINC01207 | lincRNA | 1.32 | 1.20E-05 |
| FGD5-AS1 | antisense | 1.13 | 1.08E-03 |
| FLJ22763 | lincRNA | 1.29 | 5.40E-03 |
| MIR22HG | lincRNA | 1.27 | 6.55E-03 |
| KRTAP5-AS1 | antisense | 1.33 | 7.34E-03 |
| DNMBP-AS1 | antisense | 1.22 | 9.67E-03 |
| Top 10 downregulated noncoding genes | |||
| SNHG19 | lincRNA | 0.62 | 1.19E-05 |
| SNHG8 | lincRNA | 0.73 | 1.97E-05 |
| LINC01004 | antisense | 0.64 | 9.33E-05 |
| EPB41L4A-AS1 | lincRNA | 0.74 | 2.30E-04 |
| SNHG7 | antisense | 0.78 | 2.38E-04 |
| SNHG15 | lincRNA | 0.72 | 2.56E-04 |
| PRKAG2-AS1 | antisense | 0.70 | 3.86E-04 |
| LINC00342 | lincRNA | 0.60 | 7.41E-04 |
| FAM201A | antisense | 0.70 | 8.73E-04 |
| PKI55 | lincRNA | 0.79 | 1.53E-03 |
FDR, false discovery rate; lincRNA, long intergenic noncoding RNA.