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. 2016 May 17;10(11):2605–2619. doi: 10.1038/ismej.2016.61

Table 2. Summary of ammonia oxidation rates, Thaumarchaeota abundance and the contribution of ammonia oxidation to bacterioplankton production on the Antarctic continental shelf.

  Water mass
  AASW (0–150 m) WW (50–150 m) CDW (>150 m)
Mean AO ratesa (nm per day)
 Late Winter (17–24 Sept 2010) 62±16   21±5.7
 Summer (7–30 Jan 2011)   13±2.8 24±6.6
 
Cells producedb (106 cells per liter per day)
 Winter 3.1±0.82   1.1±0.28
 Summer   0.66±0.14 1.2±0.33
 
Biomass producedc (106 cells per liter per day)
 Winter 2.3±0.60   0.79±0.21
 Summer   0.50±0.10 0.90±0.25
 
Mean abundanced (106 cells per liter)
 Winter      
  Archaea amoA 1.2±0.17   0.78±0.21
  Thaum rrs 5.6±0.90   2.9±0.94
 Summer      
  Archaea amoA   4.0±1.0 12±2.7
  Thaum rrs   2.9±0.78 14±1.7
 
Specific growth ratee (per day)
 Winter      
  Archaea amoA 1.2±0.21   0.85±0.21
  Thaum rrs 0.46±0.11   0.45±0.17
 Summer      
  Archaea amoA   0.37±0.12 0.16±0.04
  Thaum rrs   0.39±0.10 0.12±0.03
 
Specific nitrification ratef, λnitrif (per day)
 Winter 0.078±0.015   0.026±0.007
 Summer   0.009±0.002 0.057±0.016
 
Ammonium pool turnover timef (days)
 Winter 30±11   95±54
 Summer   608±189 109±30

Abbreviations: AASW, Antarctic surface water; AO, ammonia oxidation; CDW, circumpolar deep water; WW, winter water.

Means and s.e.m. are calculated using data from Supplementary Table 1.

a

Average ammonia oxidation rates from this paper (Supplementary Table 1).

b

Means from Supplementary Table 1, calculated assuming 49.5 × 1012 cells produced per mole of NH4+ oxidized (average calculated from Figures 3 and 1 in Konneke et al. (2005) and Martens-Habbena et al. (2009), respectively).

c

Means from Supplementary Table 1 calculated from cells produced assuming 9 fg C per cell (Berg et al., 2015).

d

Calculated from average gene abundances from this paper (Supplementary Table 1) assuming amoA and rrs are single-copy genes.

e

Means from Supplementary Table 1, calculated from cells produced and abundance assuming exponential growth kinetics.

f

Means from Supplementary Table 1.