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. 2016 Nov 18;7:1850. doi: 10.3389/fmicb.2016.01850

Table 1.

Probes and primers used for amplification of virulence genes in real-time PCR assays (ISO/TS 13136, 2012 and this study).

Oligo name 5′ -Label Primer sequence <5′ → 3′> 3′-Label Reference
stx1- Probe FAM CTG GAT GAT CTC AGT GGG CGT TCT TAT GTA A BHQ1 ISO/TS 13136, 2012
stx1- Forward TTT GTT ACT GTG ACA GCT GAA GCT TTA CG
stx1- Reverse CCC CAG TTC AAT GTA AGA TCA ACA TC
eae- Probe ROX ATA GTC TCG CCA GTA TTC GCC ACC AAT ACC BHQ2
eae- Forward CAT TGA TCA GGA TTT TTC TGG TGA TA
eae- Reverse CTC ATG CGG AAA TAG CCG TTA
stx2- Probe FAM CTG TCT GAA ACT GCT CCT GTG BHQ1 This study
stx2- Forward CCA GTT CAG AGT GAG GTC CA
stx2- Reverse TCA GTT CGA TAC CCG CTG CAG C
hylA-Probe ROX TCT CCG GAA TTC TTT CTG CT BHQ2 This study
hylA-Forward GCG AAA CAG CTT TAC CAA CA
hylA-Reverse CGTC TCC CGG CGTC ATC GTA