Table 1.
Probes and primers used for amplification of virulence genes in real-time PCR assays (ISO/TS 13136, 2012 and this study).
| Oligo name | 5′ -Label | Primer sequence <5′ → 3′> | 3′-Label | Reference |
|---|---|---|---|---|
| stx1- Probe | FAM | CTG GAT GAT CTC AGT GGG CGT TCT TAT GTA A | BHQ1 | ISO/TS 13136, 2012 |
| stx1- Forward | TTT GTT ACT GTG ACA GCT GAA GCT TTA CG | |||
| stx1- Reverse | CCC CAG TTC AAT GTA AGA TCA ACA TC | |||
| eae- Probe | ROX | ATA GTC TCG CCA GTA TTC GCC ACC AAT ACC | BHQ2 | |
| eae- Forward | CAT TGA TCA GGA TTT TTC TGG TGA TA | |||
| eae- Reverse | CTC ATG CGG AAA TAG CCG TTA | |||
| stx2- Probe | FAM | CTG TCT GAA ACT GCT CCT GTG | BHQ1 | This study |
| stx2- Forward | CCA GTT CAG AGT GAG GTC CA | |||
| stx2- Reverse | TCA GTT CGA TAC CCG CTG CAG C | |||
| hylA-Probe | ROX | TCT CCG GAA TTC TTT CTG CT | BHQ2 | This study |
| hylA-Forward | GCG AAA CAG CTT TAC CAA CA | |||
| hylA-Reverse | CGTC TCC CGG CGTC ATC GTA |