Table 2.
Markers associated with stripe rust response.
| Marker | Chr | Pos (cM) | GBS clone ID | Erzurum | PrE | Haymana | PrH | Izmir | PrI | Combined environments | Comment*** |
|---|---|---|---|---|---|---|---|---|---|---|---|
| M6287* | 1BL | 261.7 | 1032134 | 0.06 (2 × 10−4)** | 84.6 | Novel | |||||
| M6398* | 2AL | 159.4 | 1009953 | 0.05 (7 × 10−5) | 90.0 | 0.04 (6 × 10−4) | 40.0 | 0.03 (1 × 10−4) | 64.0 | 0.04 (8 × 10−4) | Known (QRYr2A.2) |
| M8409 | 2AL | 160.8 | 2279967 | 0.04 (8 × 10−5) | 39.0 | Known (QRYr2A.2) | |||||
| M6660* | 2DS | 28.0 | 1697765 | 0.07 (1 × 10−4) | 78.0 | 0.05 (3 × 10−4) | 53.0 | 0.05 (3 × 10−4) | Novel | ||
| M1550* | 2DL | 164.6 | 991014 | 0.03 (4 × 10−5) | 84.0 | Known (QRYr2D.2) | |||||
| M2676 | 3BL | 133.4 | 1244829 | 0.09 (8 × 10−6) | 82.0 | 0.04 (6 × 10−5) | Novel | ||||
| M4676* | 4BS | 22.5 | 2266323 | 0.07 (3 × 10−6) | 70.0 | – | |||||
| M6160* | 4BS | 59.8 | 991096 | 0.06 (3 × 10−6) | 77.0 | – | |||||
| M3383 | 5BS | 49.4 | 1862942 | 0.10 (6 × 10−4) | 78.1 | 0.03 (9 × 10−5) | Known (QRYr5B.1) | ||||
| M3486 | 5BS | 79.8 | 988021 | 0.04 (8 × 10−5) | 54.0 | Novel | |||||
| M7034 | 5BL | 176.1 | 1194694 | 0.05 (4 × 10−4) | 42.0 | Novel | |||||
| M6872* | 5BL | 232.3 | 2262945 | 0.08 (3 × 10−5) | 83.0 | 0.04 (3 × 10−4) | Novel | ||||
| M8217 | 6BS | 60.7 | 2279771 | 0.03 (7 × 10−4) | 38.0 | Known (QRYr6BS.2) |
Chr, chromosome; Pos, position in cM.
PrE, PrH, and PrI represent percentage of resistant to moderate resistant plants identified by the effective allele at each marker locus at Erzurum, Haymana, and Izmir, respectively.
*
Markers involved in epistatic interactions. Underlined markers represent same QTL.
**
R2-value of each marker and in parenthesis p-value.
***
Known QTL have been indicated as falling in metaQTL clusters reported by Rosewarne et al. (2013) based on 30 publications.