Table 1.
Statistics for Protocadherin-19 structures.
|
Data collection |
DrPCDH19 EC1-4 |
DrPCDH19 EC3-4 |
|---|---|---|
Space group |
P21 |
C2 |
Unit cell parameters |
||
a, b, c (Å) |
66.390, 59.776, 165.925 |
149.355, 86.631,132.583 |
α, β, γ (°) |
90, 94.39, 90 |
90, 122.13, 90 |
Molecules per asymmetric unit |
2 |
4 |
Beam source |
MicroMax-003 |
APS 24-ID-C |
Date of data collection |
12-DEC-14 |
31-OCT-14 |
Wavelength (Å) |
1.54187 |
0.97920 |
Resolution (Å) |
50.00–3.59 (3.66–3.59) |
50.00–2.51 (2.55–2.51) |
Unique reflections |
15416 |
47847 |
Completeness (%) |
94.8 (86.0) |
98.0 (88.1) |
Redundancy |
2.7 (2.4) |
4.4 (3.2) |
I / σ(I) |
4.90 (2.10) |
16.59 (2.21) |
Rmerge |
0.182 (0.386) |
0.072 (0.591) |
Rmeas |
0.224 (0.480) |
0.081 (0.690) |
Rpim |
0.129 (0.281) |
0.037 (0.348) |
|
CC1/2 |
0.833 (0.774) |
0.964 (0.792) |
|
CC* |
0.966 (0.934) |
0.991 (0.940) |
|
Refinement |
||
Resolution range (Å) |
50.00–3.59 (3.68–3.59) |
50.00–2.51 (2.58–2.51) |
Rwork (%) |
24.6 (41.3) |
18.8 (38.3) |
Rfree (%) |
30.5 (45.2) |
23.9 (41.6) |
Protein Residues |
839 |
827 |
Ligands/ions |
20 |
16 |
Water molecules |
15 |
49 |
Rms deviations |
||
Bond lengths (Å) |
0.0094 |
0.0112 |
Bond angles (°) |
1.4661 |
1.3915 |
B-factor average |
||
Protein |
90.75 |
77.93 |
Ligand/ion |
57.01 |
55.32 |
Water |
45.40 |
60.92 |
|
Ramachandran plot region (PROCHECK) |
||
Most favored (%) |
78.6 |
85.6 |
Additionally allowed (%) |
20.4 |
13.5 |
Generously allowed (%) |
1.1 |
1.0 |
Disallowed (%) |
0.0 |
0.0 |
|
PDB ID code |
5IU9 |
5CO1 |