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. 2016 Nov 18;17:938. doi: 10.1186/s12864-016-3288-8

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© The Author(s). 2016

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 7 — High resolution aggregation plots for in vivo occupied STAT1 sites. a Single-base resolution phyloP profile around STAT1 motifs aligned with the sequence Logo of the JASPAR STAT1 matrix. Note the reduced conservation at the weakly conserved central base of the near-palindromic STAT1 motif. b Occurrence and distance preference of a second STAT1 motif downstream of an in vivo bound motif. The control set consists of motif matches outside STAT1 peak regions. The MEME-ChIP derived PWM was used for this analysis