Table 1.
rs IDa | nucleotide change |
amino acid change |
protein domain |
minor allele frequencyb |
predictionc | |
---|---|---|---|---|---|---|
SIFT | PolyPhen-2 | |||||
rs148960463 | c.85G>A | E29K | N-clasp | 0.0006 | deleterious | possibly damaging |
rs182817281 | c.131C>T | T44M | N-clasp | 0.0002 | deleterious | possibly damaging |
rs150515841 | c.575T>G | F192C | Palm | 0.0001d | deleterious | probably damaging |
rs201034973 | c.736C>T | R246X | Palm | 0.0002 | n/ae | n/a |
rs142203892 | c.874G>A | E292K | Palm | 0.0004d | deleterious | probably damaging |
rs151251843 | c.893G>A | R298H | Palm | 0.0004 | deleterious | probably damaging |
rs149894654 | c.1412C>T | A471V | PAD | 0.0004 | deleterious | probably damaging |
rs186798689 | c.1417A>G | T473A | PAD | 0.0004 | deleterious | probably damaging |
rs142724854 | c.1534C>T | R512W | PAD | 0.0001d | deleterious | probably damaging |
Reference SNP identification number provided by dbSNP.
From 1000 Genomes project.
Possible functional effects of missense variations are predicted in silico using SIFT and PolyPhen-2 (HumVar model).
From the NHLBI ESP6500 resource described in 1000 Genomes.
Not applicable.