TABLE 2.
Haplotype | n | Municipality | Variable sites (nucleotide position)
|
Ndb | K2P %c | |||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 3 | 3 | 3 | 3 | 4 | 4 | 4 | 5 | |||||||||
2 | 5 | 7 | 0 | 0 | 1 | 5 | 6 | 7 | 9 | 0 | 0 | 1 | 4 | 5 | 6 | 6 | 6 | 7 | 9 | 9 | 1 | 5 | 6 | 8 | 4 | 7 | 8 | 1 | ||||||
5*+ | 3* | 0 | 7 | 1 | 7 | 0+ | 5 | 7 | 9 | 1 | 0 | 6 | 9 | 5 | 7 | 6 | 7 | 9 | 3 | 3 | 4 | 4* | 6* | 8 | 0 | 3* | 6 | 3 | 2 | |||||
17 | 5 | Pbeloa | A | G | G | T | C | C | A | T | A | C | T | A | T | T | A | T | C | T | A | T | A | G | C | C | C | T | G | A | G | C | ||
18 | 3 | Pbeloa | . | A | . | . | . | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | 2 | 0.37 |
19 | 2 | Pbeloa | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | C | . | . | . | . | . | . | . | . | . | C | . | . | . | . | 2 | 0.37 |
1 | 16 | Aca, Juru,LSJ | T | . | A | . | . | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | T | . | A | . | . | . | 7 | 1.31 |
2 | 1 | Aca | T | . | A | . | . | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | T | . | A | . | A | . | 8 | 1.50 |
3 | 6 | BS | T | . | A | . | . | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | T | . | A | . | . | T | 8 | 1.50 |
4 | 1 | BS | T | . | A | . | . | T | . | . | . | . | . | . | . | . | . | . | T | . | . | . | . | . | T | T | T | . | A | . | . | T | 9 | 1.68 |
5 | 1 | BS | T | . | A | . | . | T | . | . | . | . | . | . | . | . | G | . | . | . | . | C | . | . | T | T | T | . | A | . | . | T | 10 | 1.87 |
6 | 2 | BS | T | . | A | . | . | T | . | . | . | . | . | . | . | . | . | . | . | C | . | . | . | . | T | T | T | . | A | . | . | T | 9 | 1.68 |
7 | 1 | BS | C | . | . | . | . | T | C | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | T | . | A | . | . | . | 7 | 1.31 |
8 | 14 | BS, Nq, Juru, LSJ | T | . | A | . | . | T | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | T | . | A | . | . | . | 8 | 1.50 |
9 | 1 | LSJ | T | . | A | . | . | T | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | T | . | A | . | . | T | 9 | 1.68 |
10 | 1 | BS | T | . | A | . | . | T | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | T | C | A | . | . | T | 10 | 1.87 |
11 | 1 | LSJ | T | . | A | C | . | T | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | T | . | A | . | . | . | 9 | 1.68 |
12 | 1 | Juru | T | . | A | . | . | T | G | . | G | . | C | . | C | . | . | . | . | . | . | . | . | . | T | T | T | . | A | . | . | . | 11 | 2.06 |
13 | 2 | BS | T | . | A | . | . | .T | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | . | . | A | . | . | . | 7 | 1.31 |
14 | 1 | BS | T | . | A | . | T | T | G | . | G | . | . | . | . | . | . | . | . | . | . | . | G | . | T | T | . | . | A | . | . | . | 10 | 1.87 |
15 | 1 | BS | T | . | A | . | . | T | G | . | . | . | . | . | . | C | . | . | . | . | . | . | . | . | T | T | . | . | A | . | . | . | 8 | 1.50 |
16 | 3 | BS | C | . | A | . | . | . | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | . | . | A | . | . | . | 6 | 1.12 |
20 | 1 | Juru | T | . | A | . | . | T | . | . | . | . | . | G | . | . | . | . | . | . | G | . | . | . | T | T | . | . | A | . | . | . | 8 | 1.50 |
21 | 1 | LSJ | T | . | A | . | . | T | . | C | . | T | . | G | . | . | . | . | T | . | . | . | . | A | T | T | . | . | A | G | . | . | 12 | 2.24 |
Municipality acronyms: Pbelo: Portobelo (Panama, Colon); Aca: Acandí, Bahía Solano (BS), Nq: Nuquí, Juru: Jurubidá, LSJ: Litoral de San Juan (Colombia, Chocó).
Sites that separate Panama from Colombia.
Transversion
Type locality for An. neivai.
Nucleotide differences against Haplotype 17.
K2P % distance (%) against Haplotype 17.
Average K2P distance (%) between samples from Colombia and Panama: 1.62; between samples from Colombia: 0.56.