Skip to main content
. Author manuscript; available in PMC: 2016 Nov 21.
Published in final edited form as: Zootaxa. 2016 Oct 17;4175(4):377–389. doi: 10.11646/zootaxa.4175.4.7

TABLE 2.

Variable sites in An. neivai haplotypes (based in a 535 pb COI alignment).

Haplotype n Municipality Variable sites (nucleotide position)
Ndb K2P %c
1 1 1 1 1 1 1 2 2 2 2 2 2 2 2 2 2 2 3 3 3 3 4 4 4 5
2 5 7 0 0 1 5 6 7 9 0 0 1 4 5 6 6 6 7 9 9 1 5 6 8 4 7 8 1
5*+ 3* 0 7 1 7 0+ 5 7 9 1 0 6 9 5 7 6 7 9 3 3 4 4* 6* 8 0 3* 6 3 2
17 5 Pbeloa A G G T C C A T A C T A T T A T C T A T A G C C C T G A G C
18 3 Pbeloa . A . . . . . . G . . . . . . . . . . . . . . . . . . . . . 2 0.37
19 2 Pbeloa . . . . . . . . . . . . . . . C . . . . . . . . . C . . . . 2 0.37
1 16 Aca, Juru,LSJ T . A . . T . . . . . . . . . . . . . . . . T T T . A . . . 7 1.31
2 1 Aca T . A . . T . . . . . . . . . . . . . . . . T T T . A . A . 8 1.50
3 6 BS T . A . . T . . . . . . . . . . . . . . . . T T T . A . . T 8 1.50
4 1 BS T . A . . T . . . . . . . . . . T . . . . . T T T . A . . T 9 1.68
5 1 BS T . A . . T . . . . . . . . G . . . . C . . T T T . A . . T 10 1.87
6 2 BS T . A . . T . . . . . . . . . . . C . . . . T T T . A . . T 9 1.68
7 1 BS C . . . . T C . . . . . . . . . . . . . . . T T T . A . . . 7 1.31
8 14 BS, Nq, Juru, LSJ T . A . . T G . . . . . . . . . . . . . . . T T T . A . . . 8 1.50
9 1 LSJ T . A . . T G . . . . . . . . . . . . . . . T T T . A . . T 9 1.68
10 1 BS T . A . . T G . . . . . . . . . . . . . . . T T T C A . . T 10 1.87
11 1 LSJ T . A C . T G . . . . . . . . . . . . . . . T T T . A . . . 9 1.68
12 1 Juru T . A . . T G . G . C . C . . . . . . . . . T T T . A . . . 11 2.06
13 2 BS T . A . . .T G . . . . . . . . . . . . . . . T T . . A . . . 7 1.31
14 1 BS T . A . T T G . G . . . . . . . . . . . G . T T . . A . . . 10 1.87
15 1 BS T . A . . T G . . . . . . C . . . . . . . . T T . . A . . . 8 1.50
16 3 BS C . A . . . G . . . . . . . . . . . . . . . T T . . A . . . 6 1.12
20 1 Juru T . A . . T . . . . . G . . . . . . G . . . T T . . A . . . 8 1.50
21 1 LSJ T . A . . T . C . T . G . . . . T . . . . A T T . . A G . . 12 2.24

Municipality acronyms: Pbelo: Portobelo (Panama, Colon); Aca: Acandí, Bahía Solano (BS), Nq: Nuquí, Juru: Jurubidá, LSJ: Litoral de San Juan (Colombia, Chocó).

*

Sites that separate Panama from Colombia.

+

Transversion

a

Type locality for An. neivai.

b

Nucleotide differences against Haplotype 17.

c

K2P % distance (%) against Haplotype 17.

Average K2P distance (%) between samples from Colombia and Panama: 1.62; between samples from Colombia: 0.56.