Table 1.
Transcript abundances of the indicated genes enriched in interior ovary tissues collected at 70/80 DAP of P. aphrodite by RNA-seq analysis. Expression pattern of the transcripts was confirmed by qRT-PCR (Fig. 1).
| FPKM values | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Transcript ID |
Annotation |
30/40 DAP |
50/60 DAP |
70/80 DAP |
90/100/120 DAP |
140/160 DAP |
180/200 DAP |
PLB |
Protocorm |
Young leaves |
Stalk buds |
| orchid.id141182.tr411193 | PaDRM1 | 0.0 | 0.0 | 7.5 | 0.4 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| orchid.id175307.tr208591 | PaCMT1 | 13.9 | 30.7 | 103.7 | 15.3 | 7.8 | 4.6 | 7.1 | 9.0 | 11.4 | 8.5 |
| orchid.id159191.tr200827 | PaSUVR1 | 0.7 | 4.6 | 13.5 | 3.9 | 1.9 | 1.0 | 0.2 | 0.7 | 1.3 | 0.5 |
| orchid.id153148.tr220461 | PaIAA30L1 | 0.0 | 0.0 | 8.9 | 0.2 | 0.0 | 0.0 | 0.0 | 0.0 | 0.1 | 0.2 |
| orchid.id123237.tr401072 | PaEIN3L1 | 2.8 | 0.8 | 8.4 | 1.9 | 0.0 | 0.0 | 0.1 | 0.1 | 0.4 | 0.0 |