Table 1.
Real-space refinement of CmpL1 model against the EM envelope.
| Metric | |
|---|---|
| Resolution of EM map | 16-20Å |
| Map CC a | 0.742 |
| rmsd (bonds): | 0.01Å |
| rmsd (angles): | 2.10° |
| All-atom clashscore b | 34.4 |
| Ramachandran plot: | |
| outliers: | 1.17 % |
| allowed: | 24.81 % |
| favored: | 74.03 % |
| Rotamer outliers: | 2.58 % |
| C-beta deviations: | 9 |
Correlation coefficient between map density and atomic coordinates of model
calculated as 1000 * (number of bad overlaps) / (number of atoms)