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. Author manuscript; available in PMC: 2017 Oct 14.
Published in final edited form as: ACS Infect Dis. 2016 Sep 1;2(10):702–713. doi: 10.1021/acsinfecdis.6b00095

Table 1.

Real-space refinement of CmpL1 model against the EM envelope.

Metric
Resolution of EM map 16-20Å
Map CC a 0.742
rmsd (bonds): 0.01Å
rmsd (angles): 2.10°
All-atom clashscore b 34.4
Ramachandran plot:
  outliers: 1.17 %
  allowed: 24.81 %
  favored: 74.03 %
Rotamer outliers: 2.58 %
C-beta deviations: 9
a

Correlation coefficient between map density and atomic coordinates of model

b

calculated as 1000 * (number of bad overlaps) / (number of atoms)