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. 2016 Nov 21;17:942. doi: 10.1186/s12864-016-3293-y

Table 1.

Overview of proposed host-symbiont interaction proteins

Functional category Protein family Transcripts a) Proteins b)
Pattern recognition proteins
peptidoglycan recognition proteins (PGRPs) 6 (16) 1
C-type lectins 33 (119) 5
R-type lectins 6 (18) 4
SUEL/rhamnose-binding lectins 7 (22) 1
galectins 3 (3) 1
fucolectin 1 (23) 0
fibrinogen-related proteins (FREPs) 27 (161) 1
toll-like/variable lymphocyte receptor-like (TLR/VLR) 13 (52) 1
scavenger receptor cysteine-rich (SRCR) domain proteins 25 (164) 1
beta-1,3-glucan binding protein 1 (1) 1
novel immunoglobulin I-set proteins 16 (17) 1
novel immunoglobulin V-set proteins 9 (22) 1
Antimicrobial proteins
lumbricin 1 (1) 1
invertebrate-type lysozyme 1 (1) 0
bactericidal permeability increasing protein BPI 1 (3) 1
insect defensin/reeler-like proteins 4 (8) 1
cysteine-rich secretory proteins (CRSPs) 6 (28) 2
membrane attack complex/perforin 2 (23) 0
Other immune effectors
ROS modulator 1 2 (3) 1
alpha-2-macroglobulin 10 (24) 1
kazal-type serpin 2 (8) 0
kunitz-type serpin 1 (2) 0
leukocyte elastase inhibitors 5 (25) 1
phosphatidylethanolamine-binding protein PEBP 3 (5) 1
Immune response regulators
Toll/interleukin-1 receptor (TIR) domain proteins 5 (9) 0
NF-kappa-B inhibitor Cactus 2 (6) 0
dorsal protein 2 (3) 1
evolutionarily conserved signaling intermediate in Toll (ECSIT) 1 (1) 0
Pelle protein 1 (1) 0
Relish protein 1 (6) 0
mitogen-activated protein kinase kinase kinase 7 (TAK1) 1 (1) 0
I-kappa-B-kinase alpha (IKK α) 1 (1) 0
I-kappa-B-kinase beta (IKK β) 1 (5) 0
interleukin-1 receptor-associated kinase 1 (IRAK1) 1 (2) 0
mitogen-activated protein kinase kinase kinase 4 (MEKK4) 1 (1) 0
sterile alpha and TIR motif-containing protein (SARM) 1 (3) 0
Toll-interacting protein Tollip 1 (2) 1
(LPS-induced) tumor necrosis factor (TNF) 3 (7) 0
Tumor necrosis factor (TNF) 4 (6) 0
tumor necrosis factor alpha-induced protein 3 (TNFAIP3) 1 (3) 0
tumor necrosis factor receptor associated proteins (TRAF) 9 (16) 0
IFN regulatory factor 8 (10) 0
IFN regulatory factor-binding protein 1 (1) 0
IFN-induced GTPase 7 (23) 1
macrophage migration inhibitory factor (MIF) 3 (24) 1
ILN enhancer binding factor 2 2 (4) 1
ILN-16 1 (1) 0
Digestive enzymes
carboxypeptidases 11 (22) 0
cathepsins total 15 (28) 4
cathepsin B 3 (12) 1
cathepsin C 2 (4) 0
cathepsin F 3 (3) 1
cathepsin L 5 (6) 2
cathepsin O 1 (2) 0
cathepsin Z 1 (1) 0
chymotrypsins 3 (17) 1
pancreatic elastase 1 (1) 1
alpha amylase 2 (3) 1
lysosomal alpha glucosidase 1 (3) 1
acid trehalase 2 (4) 1
sucrase-isomaltase 1 (1) 0
lysosomal acid lipase 1 (1) 0
Respiration
hemerythrin 2 (2) 2
giant extracellular hemoglobin, globin chains 12 (16) 8
giant extracellular hemoglobin, linker chains 6 (18) 5
sum 316 (1032) 60

For more extensive details see Additional file 2: Table S8

a)Number of transcripts defined as Trinity components, which approximately correspond to genes; see [13]; in parentheses: number of contigs (isoforms or fragments)

b)Number of unique proteins