Table 2. Descriptors of genetic diversity for all 12 locations of Ircinia fasciculata using the data set containing 14 loci and the corrected data set with only 9 loci.
Pop. | N |
A |
rA |
pA |
Ho |
He |
FIS |
HWE |
|||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
14 Loci | 9 Loci | 14 Loci | 9 Loci | 14 Loci | 9 Loci | 14 Loci | 9 Loci | 14 Loci | 9 Loci | 14 Loci | 9 Loci | 14 Loci | 9 Loci | ||
TAR | 17 | 5.857 | 7.111 | 4.683 | 4.666 | 1.071 | 0.778 | 0.587 | 0.621 | 0.643 | 0.64 | 0.12 | 0.016 | *** | NS |
GRA | 20 | 5.857 | 5.556 | 4.129 | 3.918 | 0.786 | 0.778 | 0.482 | 0.524 | 0.613 | 0.595 | 0.245 | 0.125 | *** | NS |
CAI | 14 | 5.928 | 5.667 | 4.683 | 4.255 | 1.071 | 0.444 | 0.724 | 0.738 | 0.652 | 0.619 | −0.074 | −0.222 | * | NS |
ESC | 16 | 5.714 | 5.778 | 4.228 | 4.183 | 0.786 | 0.667 | 0.599 | 0.610 | 0.622 | 0.595 | 0.073 | −0.058 | * | NS |
TOS | 17 | 6.357 | 5.889 | 4.192 | 3.944 | 0.857 | 0.778 | 0.686 | 0.699 | 0.609 | 0.565 | −0.097 | −0.221 | *** | NS |
BLA | 24 | 6.857 | 6.444 | 4.169 | 4.055 | 0.429 | 0.556 | 0.638 | 0.676 | 0.625 | 0.604 | 0 | −0.142 | NS | NS |
CAL | 12 | 7.285 | 7.556 | 5.315 | 5.424 | 0.857 | 0.778 | 0.659 | 0.645 | 0.695 | 0.682 | 0.096 | 0.031 | ** | NS |
ALI | 10 | 5.428 | 5.444 | 4.507 | 4.506 | 0.429 | 0.556 | 0.614 | 0.644 | 0.648 | 0.632 | 0.106 | −0.056 | * | NS |
CAB | 18 | 6.571 | 5.778 | 4.537 | 4.116 | 0.643 | 0.444 | 0.607 | 0.627 | 0.658 | 0.617 | 0.107 | −0.044 | *** | NS |
COR | 6 | 3.857 | 3.889 | 3.857 | 3.889 | 0.143 | 0.222 | 0.655 | 0.722 | 0.611 | 0.608 | 0.02 | −0.233 | NS | NS |
NAP | 20 | 7.928 | 8.333 | 4.876 | 5.069 | 0.786 | 0.889 | 0.607 | 0.648 | 0.672 | 0.694 | 0.126 | 0.013 | *** | NS |
CRO | 20 | 8.000 | 8.111 | 4.737 | 4.735 | 1.500 | 1.778 | 0.648 | 0.691 | 0.655 | 0.638 | 0.039 | −0.103 | NS | NS |
Abbreviations: A, number of alleles; FIS, inbreeding coefficient; He, expected heterozygosity; Ho, observed heterozygosity; HWE, deviation from Hardy–Weinberg equilibrium; N, number of individuals; NS, not significant; pA, number of private alleles; Pop., population; rA, number of alleles after rarefaction.
*P<0.05; **P<0.01; ***P<0.001.