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. 2016 Nov 22;7:1666. doi: 10.3389/fpls.2016.01666

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Copyright © 2016 Roorkiwal, Rathore, Das, Singh, Jain, Srinivasan, Gaur, Chellapilla, Tripathi, Li, Hickey, Lorenz, Sutton, Crossa, Jannink and Varshney.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Genome-wide LD heat map constructed using SilicoDArTs and DArT-SNP markers across the 315 elite lines of chickpea. Linkage disequilibrium was calculated using r² = 0.2 as threshold. Genome-wide LD extend up to 500–2500 kb in CaLG02 and CaLG04. One huge LD block on CaLG04 was observed.