Table 2. Families of proteins with various lasso types.
Lasso | Protein families |
---|---|
L1 | • hydrolases (85), transferases (15), oxidoreductases (14), lyases (3), isomerase (1); |
• binding protein (26), antimicrobial proteins (16), viral proteins (15), immune system related (12), transport proteins (12), toxines (11), cytokines (10), membrane proteins (9) … | |
L2 | • hydrolases (9), oxidoreductases (9), transferases (4); |
• cytokines (11), immune system related (3), signaling proteins (3), viral proteins (3), other (4); | |
L3 | • hydrolases (2), isomerases (1), oxidoreductases (1); |
• transport proteins (10), allergens (3), immune system related (2), viral proteins (2), other (2); | |
L6 | • oxidoreductase (1); |
LS | • lyases (3), hydrolases (1); |
• cell adhesion related (5), metal binding protein (2), structural proteins (1), transport protein (1), GAS(1); | |
LL | • hydrolases (2); |
• cell adhesion related (2), membrane proteins (2), toxin (1), structural protein (1), cytokine (1), transport protein (1); |
In the first bullet groups of enzymes are listed in order of decreasing number of occurrences; in the second bullet PDB classes of non-enzymatic proteins are listed in order of decreasing number of occurrences. In case of L1 lasso only groups with more than 9 elements are listed.