Table 2.
Breakdown by genus of the distribution of GHs and CBMs by targeted substrate.
| SUBSTRATE | Agreia | Agrococcus | Agromyces | Candidatus Aquiluna | Candidatus Rhodoluna | Clavibacter | Cryobacterium | Cryocola | Curtobacterium | Frigoribacterium | Glaciibacter | Gulosibacter | Herbiconix | Humibacter | Leifsonia | Leucobacter | Plantibacter | Microbacterium | Mycetocola | Pseudoclavibacter | Rathayibacter | Salinibacterium | Zimmermannella | TOTAL | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| # of Genomes/Genus | 1 | 2 | 4 | 1 | 1 | 8 | 2 | 1 | 20 | 2 | 1 | 1 | 1 | 1 | 6 | 10 | 1 | 49 | 2 | 1 | 3 | 1 | 1 | 120 | |
| Oligosaccharide | Richness of GHs | 4.0 | 1.0 | 6.0 | − | − | 5.0 | 3.0 | 6.0 | 6.0 | 5.0 | 5.0 | 3.0 | 4.0 | 5.0 | 6.0 | 3.0 | 5.0 | 6.0 | 5.0 | − | 1.0 | 4.0 | 1.0 | 6.0 |
| Average # of GHs | 4.8 | 0.2 | 3.5 | − | − | 3.5 | 1.0 | 5.7 | 3.3 | 2.2 | 5.0 | 0.7 | 3.0 | 5.7 | 4.3 | 0.4 | 7.5 | 3.8 | 4.0 | − | 0.2 | 2.5 | 0.2 | 3.1 | |
| GHs per genome | 29.0 | 1.0 | 21.3 | − | − | 20.8 | 6.0 | 34.0 | 20.9 | 13.0 | 30.0 | 4.0 | 18.0 | 34.0 | 26.0 | 2.1 | 45.0 | 22.6 | 24.0 | − | 1.0 | 15.0 | 1.0 | 18.6 | |
| Starch | Richness of GHs | 3.0 | 3.0 | 3.0 | 1.0 | 2.0 | 3.0 | 4.0 | 3.0 | 3.0 | 3.0 | 3.0 | 3.0 | 2.0 | 3.0 | 3.0 | 2.0 | 3.0 | 5.0 | 1.0 | − | 3.0 | 2.0 | 3.0 | 5.0 |
| Average # of GHs | 3.8 | 3.0 | 1.3 | 0.2 | 2.0 | 3.4 | 3.8 | 3.6 | 3.6 | 3.7 | 1.8 | 2.2 | 1.4 | 2.6 | 2.4 | 0.1 | 2.6 | 2.7 | 0.8 | − | 2.2 | 0.8 | 2.2 | 2.5 | |
| GHs per genome | 19.0 | 15.0 | 6.3 | 1.0 | 10.0 | 16.9 | 19.0 | 18.0 | 17.5 | 18.5 | 9.0 | 11.0 | 7.0 | 13.0 | 12.2 | 0.7 | 13.0 | 13.4 | 4.0 | − | 11.0 | 4.0 | 11.0 | 12.6 | |
| O.A.P. | Richness of GHs | 2.0 | − | 4.0 | − | − | 1.0 | 3.0 | 1.0 | 2.0 | 1.0 | 2.0 | − | 1.0 | 1.0 | 3.0 | − | − | 4.0 | 1.0 | − | 1.0 | 1.0 | − | 4.0 |
| Average # of GHs | 1.3 | − | 0.9 | − | − | 1.0 | 1.0 | 1.3 | 1.5 | 0.5 | 0.8 | − | 0.5 | 1.5 | 1.0 | − | − | 0.8 | 0.3 | − | 0.5 | 1.0 | − | 0.8 | |
| GHs per genome | 5.0 | − | 3.5 | − | − | 4.0 | 4.0 | 5.0 | 5.7 | 2.0 | 3.0 | − | 2.0 | 6.0 | 4.0 | − | − | 3.1 | 1.0 | − | 2.0 | 4.0 | − | 3.2 | |
| O.P.P. | Richness of GHs | 3.0 | − | 7.0 | − | − | 6.0 | 4.0 | 5.0 | 7.0 | 7.0 | 3.0 | − | 1.0 | 3.0 | 6.0 | 2.0 | 3.0 | 9.0 | 4.0 | − | 1.0 | 1.0 | 2.0 | 10.0 |
| Average # of GHs | 1.4 | − | 0.8 | − | − | 0.5 | 0.3 | 1.1 | 1.0 | 0.7 | 0.9 | − | 0.1 | 0.6 | 6.3 | 0.1 | 1.4 | 0.7 | 0.6 | − | 0.1 | 0.2 | 0.3 | 0.6 | |
| GHs per genome | 14.0 | − | 8.0 | − | − | 5.1 | 3.0 | 11.0 | 10.0 | 6.5 | 9.0 | − | 1.0 | 6.0 | 6.3 | 0.5 | 14.0 | 6.7 | 6.0 | − | 1.0 | 2.0 | 3.0 | 6.1 | |
| Mixed Polysacc. | Richness of GHs | 4.0 | 1.0 | 7.0 | − | − | 3.0 | 2.0 | 3.0 | 6.0 | 2.0 | 6.0 | 1.0 | 5.0 | 3.0 | 6.0 | 1.0 | 4.0 | 11.0 | 2.0 | 1.0 | 1.0 | 1.0 | 1.0 | 11.0 |
| Average # of GHs | 1.7 | 0.7 | 0.8 | − | − | 0.2 | 0.5 | 1.2 | 0.8 | 0.7 | 0.9 | 0.3 | 0.9 | 1.2 | 0.5 | 0.3 | 1.5 | 1.1 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.8 | |
| GHs per genome | 19.0 | 7.5 | 9.0 | − | − | 2.4 | 5.5 | 13.0 | 9.4 | 8.0 | 10.0 | 3.0 | 10.0 | 13.0 | 5.5 | 3.0 | 16.0 | 12.0 | 3.0 | 3.0 | 3.0 | 3.0 | 3.0 | 8.6 | |
| Cellulose | Richness of GHs | 2.0 | − | 3.0 | − | − | 2.0 | 3.0 | 4.0 | 5.0 | 3.0 | − | − | − | 2.0 | 5.0 | − | 4.0 | 8.0 | 1.0 | − | − | − | − | 8.0 |
| Average # of GHs | 0.4 | − | 0.3 | − | − | 0.3 | 0.3 | 0.8 | 0.5 | 0.6 | − | − | − | 0.5 | 0.4 | − | 0.6 | 0.3 | 0.3 | − | − | − | − | 0.3 | |
| GHs per genome | 3.0 | − | 2.0 | − | − | 2.8 | 2.0 | 6.0 | 4.1 | 5.0 | − | − | − | 4.0 | 3.2 | − | 5.0 | 2.1 | 2.0 | − | − | − | − | 2.2 | |
| Xylan | Richness of GHs | − | − | 2.0 | − | − | 1.0 | − | − | 2.0 | − | − | − | − | − | − | − | 1.0 | 2.0 | − | 1.0 | − | − | − | 3.0 |
| Average # of GHs | − | − | 0.3 | − | − | 1.0 | − | − | 0.2 | − | − | − | − | − | − | − | 0.3 | 0.1 | − | 0.3 | − | − | − | 0.2 | |
| GHs per genome | − | − | 1.0 | − | − | 2.9 | − | − | 0.7 | − | − | − | − | − | − | − | 1.0 | 0.3 | − | 1.0 | − | − | − | 0.5 | |
| Chitin | Richness of GHs | 1.0 | − | 2.0 | − | − | 1.0 | 2.0 | 2.0 | 2.0 | 1.0 | 2.0 | − | 3.0 | 1.0 | 2.0 | 3.0 | − | 4.0 | − | − | − | 1.0 | 2.0 | 4.0 |
| Average # of GHs | 0.5 | − | 1.0 | − | − | 0.2 | 1.4 | 1.5 | 0.8 | 0.3 | 0.8 | − | 3.5 | 0.8 | 0.7 | 0.4 | − | 0.3 | − | − | − | 0.5 | 0.8 | 0.5 | |
| GHs per genome | 2.0 | − | 4.0 | − | − | 0.8 | 5.5 | 6.0 | 3.1 | 1.0 | 3.0 | − | 14.0 | 3.0 | 2.8 | 1.7 | − | 1.3 | − | − | − | 2.0 | 3.0 | 1.9 | |
| Total | Richness of GHs | 19.0 | 5.0 | 34.0 | 1.0 | 2.0 | 22.0 | 21.0 | 24.0 | 33.0 | 22.0 | 21.0 | 7.0 | 16.0 | 18.0 | 31.0 | 11.0 | 20.0 | 49.0 | 14.0 | 2.0 | 7.0 | 10.0 | 9.0 | 63.0 |
| Average # of GHs | 22.0 | 6.0 | 18.0 | 2.0 | 4.0 | 21.1 | 18.5 | 28.0 | 26.9 | 24.0 | 24.0 | 9.0 | 17.0 | 21.0 | 20.7 | 4.5 | 21.2 | 18.0 | 25.0 | 3.0 | 8.0 | 11.0 | 10.0 | 19.4 | |
| GHs per genome | 97.0 | 24.5 | 62.0 | 5.0 | 17.0 | 22.0 | 51.0 | 114 | 80.5 | 60.0 | 74.0 | 22.0 | 57.0 | 92.0 | 74.3 | 8.7 | 69.1 | 51.0 | 105 | 5.0 | 19.0 | 34.0 | 22.0 | 61.3 | |
O.A.P., other animal polysaccharides; O.P.P., other plant polysaccharides.