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. 2016 Nov 22;17:953. doi: 10.1186/s12864-016-3299-5

Table 4.

Cell wall degrading enzymes

CAZy family R. commune R. secalis R. agropyri
Number [%] Number [%] Number [%]
 GHa 182 53.8 176 53.7 183 54.3
 CEb 66 19.5 62 18.9 64 19.0
 PLc 9 2.7 9 2.7 9 2.7
 CBMd only 20 5.9 20 6.1 20 5.9
 AAe 61 18.0 61 18.6 61 18.1
 Ʃ 338 99.9 328 100.0 337 100.0
CWDE substrate R. commune R. secalis R. agropyri
Number [%] Number [%] Number [%]
 Cutin 14 4.1 14 4.3 14 4.2
 Cellulose 64 18.9 64 19.5 64 19.0
 Hemicellulose 107 31.7 101 30.8 108 32.0
 Lignin 18 5.3 18 5.5 18 5.3
 Pectin 27 8.0 27 8.2 27 8.0
 FCWf 70 20.7 68 20.7 70 20.8
 unknown 38 11.2 36 11.0 36 10.7
 Ʃ 338 99.9 328 100.0 337 100.0

aglycoside hydrolases

bcarbohydrate esterases

cpolysaccharide lyases

dcarbohydrate-binding modules

eauxiliary activities

ffungal cell wall