TABLE 3.
Core genes exhibiting dN/dS ratio >2
| Species | Gene name | Annotation | Length (nt) | No. of synonymous changes | No. of nonsynonymous changes | dN/dSa |
|---|---|---|---|---|---|---|
| L. crispatus | comEB | dCMP deaminase | 159 | 0 | 4 | inf |
| LCRIS_RS01075 | β-Propeller of dehydrogenase | 194 | 0 | 3 | inf | |
| purR | PUR operon repressor | 276 | 0 | 9 | inf | |
| psiE | Phosphate starvation | 135 | 0 | 7 | inf | |
| ribF | Riboflavin biosynthesis | 316 | 0 | 6 | inf | |
| LCRIS_RS09970 | Haloacid dehydrogenase | 257 | 0 | 5 | inf | |
| LCRIS_RS09110 | Enterocin A immunity | 107 | 0 | 4 | inf | |
| LCRIS_RS05415 | Homocysteine methyltransferase | 76 | 0 | 3 | inf | |
| LCRIS_RS09270 | tet(R) transcription regulator | 174 | 1 | 9 | 3.307 | |
| LCRIS_RS03325 | α/β-Superfamily hydrolase | 306 | 1 | 10 | 3.072 | |
| LCRIS_RS06755 | α/β-Superfamily hydrolase | 291 | 1 | 8 | 2.871 | |
| LCRIS_RS05305 | Lactocepin S-layer protein | 166 | 1 | 9 | 2.504 | |
| LCRIS_00991 | d-Gluconic acid reductase | 278 | 1 | 11 | 2.209 | |
| L. iners | RS0100505 | Uncharacterized protein | 94 | 0 | 4 | inf |
| RS06445 | Uncharacterized protein | 75 | 1 | 9 | 3.25 |
a
inf, infinity.