Table 2.
Genotype/Allele | Control (n=298) | Early onset depression (n=130) | Crude OR (95% CI) | p | Adjusted OR* (95% CI) | p | Late onset depression (n=128) | Crude OR (95% CI) | p | Adjusted OR* (95% CI) | p |
---|---|---|---|---|---|---|---|---|---|---|---|
N (Freq.) | N (Freq.) | N (Freq.) | |||||||||
c.-441G>A – FEN1 (rs174538) | |||||||||||
A/A | 0 (−) | 0 (−) | – | – | – | – | 0 (–) | – | – | – | – |
A/G | 151 (0.49) | 59 (0.45) | 0.88 (0.58–1.33) | 0.544 | 0.88 (0.58–1.33) | 0.549 | 50 (0.39) | 0.68 (0.45–1.03) | 0.070 | 0.68 (0.45–1.04) | 0.073 |
G/G | 160 (0.51) | 71 (0.55) | 1.14 (0.75–1.71) | 0.544 | 1.13 (0.75–1.71) | 0.549 | 78 (0.61) | 1.47 (0.97–2.24) | 0.070 | 1.47 (0.96–2.23) | 0.073 |
χ2=0.253; p=0.615 | χ2=2.919; p=0.088 | ||||||||||
A | 151 (0.24) | 59 (0.23) | 0.88 (0.58–1.33) | 0.544 | 0.88 (0.58–1.33) | 0.549 | 50 (0.19) | 0.68 (0.45–1.03) | 0.070 | 0.68 (0.45–1.04) | 0.073 |
G | 471 (0.76) | 201 (0.77) | 1.14 (0.75–1.71) | 0.544 | 1.13 (0.75–1.71) | 0.549 | 206 (0.81) | 1.47 (0.97–2.24) | 0.070 | 1.47 (0.96–2.23) | 0.073 |
c.2285T>C – PARP1 (rs1136410) | |||||||||||
A/A | 201 (0.65) | 85 (0.65) | 1.03 (0.67–1.59) | 0.880 | 1.03 (0.67–1.58) | 0.898 | 86 (0.67) | 1.12 (0.72–1.73) | 0.609 | 1.13 (0.73–1.75) | 0.590 |
A/G | 103 (0.33) | 39 (0.30) | 0.86 (0.56–1.35) | 0.523 | 0.87 (0.56–1.36) | 0.542 | 35 (0.27) | 0.76 (0.48–1.12) | 0.237 | 0.75 (0.48–1.19) | 0.219 |
G/G | 7 (0.02) | 6 (0.05) | 2.10 (0.69–6.38) | 0.190 | 2.08 (0.68–6.31) | 0.197 | 7 (0.06) | 2.51 (0.86–7.31) | 0.091 | 2.60 (0.89–7.60) | 0.081 |
χ2=2.024; p=0.364 | χ2=3.997; p=0.136 | ||||||||||
A | 505 (0.81) | 209 (0.80) | 0.95 (0.65–1.38) | 0.776 | 0.94 (0.65–1.37) | 0.766 | 207 (0.81) | 0.98 (0.67–1.42) | 0.908 | 0.98 (0.67–1.43) | 0.914 |
G | 117 (0.19 | 51 (0.20) | 1.06 (0.73–1.54) | 0.776 | 1.06 (0.73–1.54) | 0.766 | 49 (0.19) | 1.02 (0.70–1.49) | 0.908 | 1.02 (0.70–1.49) | 0.914 |
c.580C>T – XRCC1 (rs1799782) | |||||||||||
G/G | 274 (0.88) | 108 (0.83) | 0.66 (0.37–1.18) | 0.159 | 0.67 (0.38–1.19) | 0.174 | 110 (0.86) | 0.83 (0.45–1.51) | 0.534 | 0.79 (0.43–1.46) | 0.459 |
G/A | 36 (0.12) | 21 (0.16) | 1.47 (0.82–2.63) | 0.193 | 1.45 (0.81–2.61) | 0.210 | 17 (0.13) | 1.17 (063–2.17) | 0.618 | 1.21 (0.65–2.26) | 0.547 |
A/A | 1 (0.00) | 1 (0.01) | 2.40 (0.15–38.7) | 0.536 | 2.41 (0.15–38.9) | 0.535 | 1 (0.01) | 2.44 (0.15–39.3) | 0.529 | 2.71 (0.17–43.9) | 0.484 |
χ2=2.159; p=0.334 | χ2=0.688; p=0.709 | ||||||||||
G | 584 (0.94) | 237 (0.91) | 0.67 (0.39–1.15) | 0.146 | 0.68 (0.39–1.17) | 0.159 | 237 (0.93) | 0.81 (0.46–1.44) | 0.475 | 0.78 (0.44–1.39) | 0.400 |
A | 38 (0.06) | 23 (0.09) | 1.49 (0.87–2.57) | 0.146 | 1.48 (0.86–2.55) | 0.159 | 19 (0.07) | 1.23 (0.70–2.18) | 0.475 | 1.28 (0.72–2.28) | 0.400 |
c.1196A>G – XRCC1 (rs25487) | |||||||||||
C/C | 130 (0.42) | 52 (0.40) | 0.93 (0.61–1.41) | 0.736 | 0.92 (0.61–1.40) | 0.706 | 50 (0.39) | 0.89 (0.59–1.36) | 0.596 | 0.91 (0.59–1.38) | 0.642 |
C/T | 138 (0.44) | 65 (0.50) | 1.25 (0.83–1.89) | 0.208 | 1.26 (0.84–1.90) | 0.268 | 60 (0.47) | 1.11 (0.73–1.67) | 0.632 | 1.10 (0.73–1.66) | 0.654 |
T/T | 43 (0.14) | 13 (0.10) | 0.69 (0.36–1.34) | 0.273 | 0.69 (0.36–1.34) | 0.273 | 18 (0.14) | 1.02 (0.56–1.85) | 0.948 | 1.01 (0.55–1.82) | 0.987 |
χ2=1.760; p=0.415 | χ2=0.295; p=0.863 | ||||||||||
C | 398 (0.64) | 169 (0.65) | 1.05 (0.77–1.42) | 0.774 | 1.04 (0.77–1.41) | 0.789 | 160 (0.63) | 0.94 (0.70–1.27) | 0.681 | 0.95 (0.70–1.28) | 0.734 |
T | 224 (0.36) | 91 (0.35) | 0.96 (0.71–1.30) | 0.774 | 0.96 (0.71–1.30) | 0.789 | 96 (0.37) | 1.06 (0.79–1.43) | 0.681 | 1.05 (0.78–1.42) | 0.734 |
c.*83A>C – LIG3 (rs4796030) | |||||||||||
A/A | 31 (0.10) | 28 (0.21) | 2.48 (1.42–4.34) | 0.001 | 2.48 (1.42–4.34) | 0.001 | 24 (0.19) | 2.08 (1.17–3.72) | 0.013 | 2.06 (1.15–3.67) | 0.015 |
A/C | 135 (0.43) | 58 (0.45) | 1.05 (0.69–1.59) | 0.816 | 1.06 (0.70–1.60) | 0.792 | 46 (0.36) | 0.73 (0.48–1.12) | 0.149 | 0.73 (0.47–1.11) | 0.141 |
C/C | 145 (0.47) | 44 (0.34) | 0.59 (0.38–0.90) | 0.014 | 0.58 (0.38–0.89) | 0.013 | 58 (0.45) | 0.95 (0.63–1.43) | 0.802 | 0.96 (0.64–1.46) | 0.851 |
χ2=12.697; p=0.002 | χ2=6.844; p=0.033 | ||||||||||
A | 197 (0.32) | 114 (0.44) | 1.66 (1.23–2.23) | <0.001 | 1.67 (1.24–2.24) | <0.001 | 94 (0.37) | 1.23 (0.92–1.66) | 0.164 | 1.22 (0.91–1.65) | 0.184 |
C | 425 (0.68) | 146 (0.56) | 0.60 (0.45–0.81) | <0.001 | 0.60 (0.45–0.81) | <0.001 | 162 (0.63) | 0.81 (0.60–1.09) | 0.164 | 0.82 (0.61–1.10) | 0.184 |
c.*50C>T – LIG3 (rs1052536) | |||||||||||
C/C | 56 (0.18) | 40 (0.31) | 2.02 (1.26–3.24) | 0.003 | 2.02 (1.26–3.24) | 0.003 | 32 (0.25) | 1.52 (0.93–2.49) | 0.098 | 1.53 (0.93–2.50) | 0.094 |
C/T | 166 (0.53) | 64 (0.49) | 0.85 (0.56–1.28) | 0.427 | 0.84 (0.56–1.27) | 0.408 | 58 (0.55) | 0.72 (0.48–1.09) | 0.125 | 0.73 (0.48–1.10) | 0.133 |
T/T | 89 (0.29) | 26 (0.20) | 0.62 (0.38–1.02) | 0.062 | 0.63 (0.38–1.03) | 0.066 | 38 (0.30) | 1.05 (0.67–1.66) | 0.822 | 1.04 (0.66–1.64) | 0.863 |
χ2=9.773; p=0.008 | χ2=3.404; p=0.182 | ||||||||||
C | 278 (0.45) | 144 (0.55) | 1.58 (1.16–2.13) | 0.003 | 1.57 (1.16–2.13) | 0.003 | 122 (0.48) | 1.13 (0.84–1.52) | 0.417 | 1.14 (0.85–1.53) | 0.392 |
T | 344 (0.55) | 116 (0.45) | 0.64 (0.47–0.86) | 0.003 | 0.64 (0.47–0.86) | 0.003 | 134 (0.52) | 0.88 (0.66–1.19) | 0.417 | 0.88 (0.65–1.18) | 0.392 |
c.-7C>T – LIG1 (rs20579) | |||||||||||
A/A | 3 (0.01) | 3 (0.02) | 2.43 (0.48–12.2) | 0.282 | 2.43 (0.48–12.2) | 0.281 | 4 (0.03) | 3.31 (0.73–15.0) | 0.120 | 3.20 (0.70–14.6) | 0.132 |
A/G | 73 (0.23) | 25 (0.19) | 0.78 (0.47–1.29) | 0.329 | 0.78 (0.47–1.29) | 0.328 | 32 (0.25) | 1.09 (0.67–1.75) | 0.733 | 1.09 (0.68–1.76) | 0.718 |
G/G | 235 (0.76) | 102 (0.79) | 1.18 (0.72–1.93) | 0.513 | 1.18 (0.72–1.93) | 0.512 | 92 (0.72) | 0.83 (0.52–1.32) | 0.421 | 0.83 (0.52–1.31) | 0.417 |
χ2=2.059; p=0.357 | χ2=2.908; p=0.234 | ||||||||||
A | 79 (0.13) | 31 (0.12) | 0.93 (0.59–1.45) | 0.748 | 0.93 (0.59–1.45) | 0.747 | 40 (0.16) | 1.28 (0.84–1.94) | 0.246 | 1.28 (0.84–1.94) | 0.249 |
G | 543 (0.87) | 229 (0.88) | 1.08 (0.69–1.68) | 0.748 | 1.08 (0.69–1.68) | 0.747 | 216 (0.84) | 0.78 (0.52–1.19) | 0.246 | 0.78 (0.52–1.19) | 0.249 |
c.-468T>G – APEX1 (rs1760944) | |||||||||||
T/T | 56 (0.18) | 16 (0.12) | 0.64 (0.35–1.16) | 0.142 | 0.64 (0.35–1.16) | 0.137 | 29 (0.23) | 1.33 (0.81–2.21) | 0.263 | 1.34 (0.81–2.23) | 0.254 |
T/G | 142 (0.46) | 73 (0.56) | 1.52 (1.01–2.30) | 0.045 | 1.52 (1.01–2.29) | 0.047 | 66 (0.52) | 1.27 (0.84–1.91) | 0.261 | 1.27 (0.84–1.92) | 0.253 |
G/G | 113 (0.36) | 41 (0.32) | 0.81 (0.52–1.25) | 0.336 | 0.81 (0.53–1.26) | 0.353 | 33 (0.26) | 0.61 (0.39–0.96) | 0.034 | 0.60 (0.38–0.95) | 0.031 |
χ2=2.908; p=0.234 | χ2=4.716; p=0.095 | ||||||||||
T | 254 (0.41) | 105 (0.40) | 0.98 (0.73–1.32) | 0.900 | 0.98 (0.73–1.31) | 0.872 | 124 (0.48) | 1.35 (1.01–1.80) | 0.043 | 1.36 (1.01–1.82) | 0.039 |
G | 368 (0.59) | 155 (0.60) | 1.02 (0.76–1.37) | 0.900 | 1.03 (0.76–1.38) | 0.872 | 132 (0.52 | 0.74 (0.56–0.99) | 0.043 | 0.74 (0.55–0.98) | 0.039 |
c.444T>G – APEX1 (rs1130409) | |||||||||||
G/G | 71 (0.23) | 27 (0.21) | 0.89 (0.54–1.46) | 0.635 | 0.89 (0.54–1.48) | 0.664 | 33 (0.26) | 1.17 (0.73–1.89) | 0.509 | 1.17 (0.73–1.89) | 0.517 |
G/T | 164 (0.53) | 68 (0.52) | 0.98 (0.65–1.48) | 0.935 | 0.98 (0.65–1.47) | 0.914 | 66 (0.51) | 0.95 (0.63–1.44) | 0.823 | 0.96 (0.64–1.45) | 0.844 |
T/T | 76 (0.24) | 35 (0.27) | 1.14 (0.72–1.82) | 0.584 | 1.14 (0.71–1.81) | 0.590 | 29 (0.23) | 0.91 (0.55–1.48) | 0.691 | 0.90 (0.55–1.47) | 0.677 |
χ2=0.403; p=0.817 | χ2=0.477; p=0.788 | ||||||||||
G | 306 (0.49) | 122 (0.47) | 0.91 (0.67–1.22) | 0.527 | 0.91 (0.68–1.23) | 0.547 | 132 (0.52) | 1.11 (0.82–1.49) | 0.514 | 1.11 (0.82–1.49) | 0.512 |
T | 316 (0.51) | 138 (0.53) | 1.10 (0.82–1.48) | 0.527 | 1.10 (0.81–1.48) | 0.547 | 124 (0.48) | 0.91 (0.67–1.22) | 0.514 | 0.91 (0.67–1.22) | 0.512 |
Early onset depression – the first episode occurred at or before 35 years of age. Late onset depression – the first episode occurred after 35 years of age.
OR adjusted for sex. p<0.050 along with corresponding ORs are in bold; p<0.012 along with corresponding ORs are in bold and italic.