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. Author manuscript; available in PMC: 2016 Nov 23.
Published in final edited form as: Pac Symp Biocomput. 2012:94–103.

Table 1.

Comparison of predicted disorder scores between PTM sites and non-PTM sites. Predicted disorder score rages from 0 to 1. Higher score mean larger possibility of being in a disordered region. The p-value for the significance of the disorder score difference is based on two-tailed, two-sample student t-test.

PTM UniProt keyword # of
PTM
sites
Amino
acid
Mean fluctuation (Å) p-value

PTM
sites
Non-PTM
sites
Phosphorylation Phosphoserine 53080 S 0.81 > 0.59 0
Phosphorylation Phosphothreonine 13477 T 0.69 > 0.49 0
Phosphorylation Phosphotyrosine 8075 Y 0.46 > 0.35 7.58E-287
Phosphorylation Phosphohistidine 357 H 0.40 < 0.47 2.28E-14
Phosphorylation 4-aspartylphosphate 529 D 0.20 < 0.51 1.74E-240
Methylation Cysteine methyl ester 491 C 0.78 > 0.35 6.82E-199
Methylation N6-methyllysine 499 K 0.78 > 0.56 2.22E-64
Methylation Glutamate methyl ester 40 E 0.84 > 0.58 8.63E-21
Methylation Omega-N-methylarginine 98 R 0.81 > 0.52 1.01E-20
Methylation Leucine methyl ester 14 L 0.69 > 0.41 5.59E-11
Methylation N5-methylglutamine 10 Q 0.57 > 0.55 9.22E-02
Methylation Pros-methylhistidine 10 H 0.37 < 0.47 1.07E-01
Methylation N4-methylasparagine 65 N 0.46 < 0.49 6.14E-02
Methylation 5-methylarginine 11 R 0.46 < 0.53 5.30E-02
Methylation S-methylcysteine 12 C 0.26 < 0.35 3.14E-02
Methylation Tele-methylhistidine 47 H 0.12 < 0.47 7.77E-167
Dimethylation Asymmetric dimethylarginine 385 R 0.90 > 0.52 3.67E-171
Dimethylation Symmetric dimethylarginine 57 R 0.91 > 0.52 3.76E-25
Dimethylation N6,N6-dimethyllysine 340 K 0.72 > 0.56 8.13E-25
Dimethylation Omega-N-methylated arginine 247 R 0.72 > 0.52 1.04E-18
Trimethylation N6-methylated lysine 374 K 0.69 > 0.56 1.36E-18
Trimethylation N6,N6,N6-trimethyllysine 696 K 0.57 > 0.56 1.92E-01
Hydroxylation 4-hydroxyproline 900 P 0.89 > 0.60 2.27E-236
Hydroxylation 5-hydroxylysine 179 K 0.97 > 0.56 8.65E-136
Hydroxylation 3-hydroxyproline 11 P 1.00 > 0.60 6.28E-128
Acetylation N2-acetylarginine 32 R 0.67 > 0.52 3.09E-05
Acetylation N6-acetyllysine 11436 K 0.54 < 0.56 6.83E-09
ADP-ribosylation ADP-ribosylcysteine 12 C 0.30 < 0.35 3.79E-01
ADP-ribosylation ADP-ribosylasparagine 8 N 0.15 < 0.49 1.71E-06
ADP-ribosylation ADP-ribosylserine 7 S 0.46 < 0.59 4.80E-10
ADP-ribosylation ADP-ribosylarginine 87 R 0.18 < 0.52 3.26E-78
Deamidation Deamidated glutamine 43 Q 0.77 > 0.55 4.86E-20
Deamidation Deamidated asparagine 74 N 0.42 < 0.49 3.80E-02
FAD attachment Pros-8alpha-FAD histidine 21 H 0.54 > 0.47 4.39E-02
FAD attachment Tele-8alpha-FAD histidine 36 H 0.33 < 0.47 2.04E-11
FAD attachment S-8alpha-FAD cysteine 52 C 0.21 < 0.35 2.40E-23
FMN conjugation FMN phosphoryl threonine 33 T 0.37 < 0.49 3.01E-10
FMN conjugation S-4a-FMN cysteine 21 C 0.20 < 0.35 6.46E-13
Carboxylation 4-carboxyglutamate 647 E 0.65 > 0.58 1.66E-19
Geranyl-geranylation S-geranylgeranyl cysteine 29 C 0.81 > 0.35 3.20E-12
Palmitoylation S-palmitoyl cysteine 155 C 0.29 < 0.35 1.03E-02
S-diacylglycerol cysteine S-diacylglycerol cysteine 37 C 0.39 > 0.35 2.36E-01
S-Nitrosylation S-nitrosocysteine 56 C 0.27 < 0.35 8.63E-06
Sulfation Sulfotyrosine 561 Y 0.58 > 0.35 2.87E-77
Dihydroxylation 4,5-dihydroxylysine 8 K 0.32 < 0.56 3.93E-05
Bromination 6′-bromotryptophan 24 W 0.46 > 0.30 1.21E-03
Beta-methylthiolation 3-methylthioaspartic acid 503 D 0.38 < 0.51 0