Table 1. AUPRs for the DREAM4 Networks.

	Size 10 Networks
	BGRMI	Jump3	GENIE3	CLR	Inferelator	ScanBMA	G1DBN
Net1	0.635	0.498	0.555	0.465	0.643	—	0.564
Net2	0.524	0.396	0.351	0.447	0.443	—	0.392
Net3	0.566	0.44	0.407	0.414	0.509	—	0.499
Net4	0.751	0.584	0.519	0.555	0.653	—	0.76
Net5	0.615	0.646	0.787	0.885	0.637	—	0.77
Average	0.618	0.513	0.524	0.553	0.577	0.505	0.597
Net 1	0.245	0.27	0.228	0.179	0.126	—	0.089
Net2	0.118	0.11	0.096	0.109	0.101	—	0.055
Net3	0.185	0.2	0.23	0.238	0.198	—	0.155
Net4	0.213	0.18	0.157	0.154	0.147	—	0.153
Net5	0.154	0.174	0.168	0.163	0.148	—	0.117
Average	0.184	0.187	0.176	0.167	0.144	0.101	0.114
	Overall average
All Nets	0.401	0.35	0.35	0.36	0.3605	0.303	0.3555

The numbers in bold represent the best performer. The authors of the scanBMA algorithm published only the average AUPR for size 10 and size 100 category, therefore we showed only the average AUPRs for scanBMA.