Table 3. Multilocus sequence types and allelic profiles of environmental isolates.
PCR ribotype | Isolate | ST | Clade | MLST allelic profile | ||||||
---|---|---|---|---|---|---|---|---|---|---|
adk | atpA | dxr | glyA | recA | sodA | tpi | ||||
SLO 204 | ZZV14-6150 | 341 | C-III | 26 | 35 | 39 | 52 | 31 | 49 | 52 |
SLO 204 | ZZV13-5731 | 344 | C-III | 26 | 36 | 39 | 52 | 31 | 49 | 52 |
SLO 204 | ZZV14-6044 | 344 | C-III | 26 | 36 | 39 | 52 | 31 | 49 | 52 |
SLO 205 | ZZV14-6045 | 343 | C-III | 26 | 36 | 37 | 54 | 31 | 49 | 52 |
SLO 206 | ZZV14-5902 | 339 | C-III | 26 | 35 | 37 | 54 | 31 | 49 | 52 |
SLO 208 | ZZV15-6048 | 343 | C-III | 26 | 36 | 37 | 54 | 31 | 49 | 52 |
SLO 214 | ZZV15-6009 | 343 | C-III | 26 | 36 | 37 | 54 | 31 | 49 | 52 |
SLO 218 | ZZV15-6154 | 342 | C-III | 26 | 35 | 39 | 54 | 31 | 47 | 50 |
SLO 221 | ZZV14-6345 | 337 | C-II | 25 | 21 | 38 | 53 | 21 | 36 | 53 |
SLO 222 | ZZV15-6383 | 338 | C-II | 25 | 21 | 38 | 53 | 21 | 48 | 53 |
SLO 223 | ZZV15-6388 | 345 | C-III | 27 | 37 | 39 | 55 | 31 | 49 | 54 |
SLO 229 | ZZV14-6387 | 335 | C-I | 13 | 17 | 22 | 33 | 18 | 31 | 51 |
SLO 230 | ZZV15-6597 | 346 | C-III | 27 | 38 | 40 | 56 | 31 | 49 | 55 |
SLO 240 | ZZV15-6598 | 347 | C-III | 28 | 39 | 41 | 57 | 30 | 50 | 56 |
SLO 251 | ZZV14-6153 | 336 | C-III | 24 | 36 | 37 | 54 | 31 | 49 | 50 |