Skip to main content
. 2016 Nov 23;54(12):2910–2918. doi: 10.1128/JCM.01580-16

TABLE 3.

Overview of standardization results of the 12 clinical strains belonging to 11 fungal species included in the new panfungal qPCR assaya

Species FAM (panfungal channel)
HEX (Mucorales channel)
ROX (Aspergillus sp. channel)
Cy5 (endemic mycosis fungus channel)
S R2 CV (%) DL (fg/μl) S R2 CV (%) DL (fg/μl) S R2 CV (%) DL (fg/μl) S R2 CV (%) DL (fg/μl)
Rhizopus oryzae −3.6 0.99 2.45 0.1 −3.6 0.99 2.05 0.1
Rhizopus microsporus −3.6 0.98 1.54 0.1 −3.8 0.98 3.05 0.1
Mucor circinelloides −3.4 0.98 3.76 0.1 −3.7 0.98 4.67 1
Aspergillus fumigatus −3.5 0.97 2.72 1 −4.1 0.95 3.73 1
Aspergillus flavus −3.8 0.98 3.69 1 −4.1 0.98 3.05 1
Aspergillus terreus −3.5 0.98 1.52 1 −4.1 0.98 3.6 1
Histoplasma capsulatum var. capsulatum −3.5 0.98 2.23 1 −3.5 0.98 1.98 1
Histoplasma capsulatum var. duboisii −3.4 0.98 2.21 10 −3.3 0.98 2.16 10
Coccidioides immitis −3.5 0.96 2.9 10 −4.6 0.96 4.4 10
Coccidioides posadasii −5.1 0.95 3.98 10 −6.6 0.97 5.69 100
Blastomyces dermatitidis −3.4 0.98 1.93 1 −3.2 0.98 1.67 1
Paracoccidioides brasiliensis −2.8 0.98 0.73 1 −2.8 0.98 0.47 1
a

S, slope of standard curve; R2, coefficient of determination; CV, coefficient of variation; DL, detection limit.