Table 1. Percentage of total viral reads mapping to viral contigs of the Apis mellifera library, cutoff at 0.0001%.
| Virus | Reads (%) |
|---|---|
| Varroa destructor virus-1 | 48.4452 |
| Deformed wing virus | 38.4967 |
| Black queen cell virus | 9.9200 |
| Sacbrood virus | 2.9849 |
| Grapevine Bulgarian latent like | 0.0193 |
| Lake Sinai virus 1 | 0.0035 |
| Tobamovirus | 0.0032 |
| Farmington virus* | 0.0001 |
*A new virus of the length 14,606 bp was discovered in the A. mellifera transcriptome.
The virus belongs to the genus of unclassified Rhabdoviridae with protein similarities to Farmington virus, Drosophila sturtevani rhabdovirus 1, Wuhan House Fly Virus 2 and Drosophila subobscura rhabdovirus (see also Supplementary Table S6).