Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2016 Nov 24;6:37770. doi: 10.1038/srep37770

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

Copyright © 2016, The Author(s)

This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/

PMC Copyright notice

(A) PCA plot of the 500 genes with the highest variances. (B) Venn diagram of the DEGs with a Padj value cutoff of 0.01 in different temperature comparisons⁵². (C)The heatmap showing the negative log₁₀ Padj value of DEGs are shown for the six major clusters generated by the fold change pattern. The six major clusters are indicated by the grey coloured heatmap, which indicate the fold change direction for M/L and H/M, respectively. A fold-change value of <2 or Padj value >0.01 was considered as unchanged for this cluster generation. (D) The GO network of the top 15 enrichments of each cluster that satisfy a significant P < 0.05 of the hypergeometric test with FDR correction from BiNGO. The blue and red colours indicate enrichment of genes that are upregulated against high and low temperature, respectively. The GO terms that are upregulated in mid temperature are shown in green. ATPET, ATP synthesis coupled electron transport; C, chloroplast; CBP, cellular biosynthetic process; CelR, cellular respiration; CGMP, cellular glucan metabolic process; CMBP, cellular macromolecule biosynthetic process; CPMP, cellular polysaccharide metabolic process; CX, complex; Cy, cytosolic; ENV, envelope; ETC, electron transport chain; GMP, glucan metabolic process; INT, intracellular; LH, light harvesting; LRS, large ribosomal subunit; MBO, membrane-bound organelle; MCX, macromolecular complex; MP, metabolic process; ND, NADH dehydrogenase; NMBO, non-membrane-bound organelle; NMBO, non-membrane-bounded organelle; NRPLR, negative regulation of photosynthesis; OP, oxidative phosphorylation; OP, organelle part; OSC, organelle subcompartment; P, plastid; PHO, photosynthesis; PHOMEM, photosynthetic membrane; PMP, polysaccharide metabolic process; Q, quinone; R, ribosome; RETC, respiratory electron transport chain; RIB, ribonucleoprotein; RTAS, response to abiotic stimulus; RTLS, response to light stimulus; RTR, response to light radiation; SAMdma, S-adenosylmethionine-dependent methyltransferase activity; SCoR, structural constituent of ribosome; SMA, structural molecule activity; UQ, ubiquinone.