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. 2016 Nov 24;17:970. doi: 10.1186/s12864-016-3311-0

Table 1.

Main features of the putatively co-regulated clusters found during flux-correlation analysis. In this table, for each cluster, we report its number, the name of the regulator identified, the genes embedded in it and the conserved motif found upstream of its genes

Cluster name Motif name Genes Weblogo
Cluster 2 ArgR PSHAa0194, PSHAa0698,PSHAa2175, PSHAa2287, PSHAa2290, PSHAa2291, PSHAa2292, PSHAb0333, PSHAb0428, PSHAb0543 graphic file with name 12864_2016_3311_Figa_HTML.gif
Cluster 3 CcpA PSHAa0189, PSHAa0609, PSHAa0740, PSHAa1167, PSHAa1648, PSHAa1649, PSHAa1650, PSHAa1651, PSHAa2167, PSHAb0082, PSHAb0345 graphic file with name 12864_2016_3311_Figb_HTML.gif
Cluster 6 GalR PSHAa0603, PSHAa0871, PSHAa1364, PSHAa1767, PSHAa2301, PSHAb0295 graphic file with name 12864_2016_3311_Figc_HTML.gif