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. 2016 May 23;7(25):38487–38499. doi: 10.18632/oncotarget.9555

Figure 1. Identification of lncRNA.

Figure 1

(A) A pipeline for identifying and annotating lncRNA; (B) Number of distinct lncRNA transcripts identified in all samples. Linc: long intergenic non-coding transcript; LongAUGORFlinc: long intergenic non-coding transcript that contains open reading frames with in-frame codons enclosed within AUG and stop codons; EnsASCoding: an antisense transcript; EnsShortNoncoding: a precursor for small RNAs; LongAUGORFEnsASCoding: an antisense transcript that contains open reading frames with in-frame codons enclosed within AUG and stop codons; LongAUGORFEnsShortNoncoding: a precursor for small RNAs that contains open reading frames with in-frame codons enclosed within AUG and stop codons; LongORFlinc: long intergenic non-coding transcript that contains open reading frames; LongORFEnsASCoding: an antisense transcript that contains open reading frames; LongORFEnsShortNoncoding: a precursor for small RNAs that contains open reading frames; and (C) A list of significantly differentially expressed lncRNA transcripts.