Table 3.
Descriptions of genes or ORFs present in the hotspot regions of ICEMprChn1.
| Hotspot region | ICEMprChn1 gene/ORF id | Gene name | Length (bp) | Hotspot gene product name | GenBank accession no. of protein homolog | % Similarity with homolog |
|---|---|---|---|---|---|---|
| HS-5 (s026-traI) | D104_09935 | mprchn1-1 | 3333 | DNA or RNA helicase | Salmonella enterica; WP_060636796.1 | 100 |
| D104_09940 | mprchn1-2 | 687 | Hypothetical protein | Salinivibrio socompensis; WP_025674120.1 | 99 | |
| D104_09945 | mprchn1-3 | 1947 | DNA methyltransferase | Pseudomonas aeruginosa; WP_034019474.1 | 99 | |
| D104_09950 | mprchn1-4 | 3078 | Type III restriction enzyme R subunit | Shewanella decolorationis; WP_023266696.1 | 99 | |
| D104_09955 | mprchn1-5 | 855 | Restriction endonuclease | Vibrio fluvialis; WP_052075075.1 | 98 | |
| HS-1 (traJ-traL) | D104_09980 | mprchn1-6 | 1557 | Transposase | Gammaproteobacteria; WP_000850406.1 | 100 |
| D104_09985 | mprchn1-7 | 96 | Hypothetical protein | – | N.h | |
| D104_09995 | mprchn1-8 | 219 | Hypothetical protein | Gammaproteobacteria; WP_013785946.1 | 99 | |
| D104_10000 | mprchn1-9 | 243 | Hypothetical protein | Nitrincola sp. A-D6; WP_036520787.1 | 98 | |
| D104_10005 | mprchn1-10 | 708 | RES domain-containing protein | Nitrincola nitratireducens; WP_036513282.1 | 67 | |
| D104_10010 | mprchn1-11 | 372 | Hypothetical protein | Neptunomonas Antarctica; WP_054341548.1 | 79 | |
| D104_10015 | mprchn1-12 | 693 | TetR family transcriptional regulator | Alteromonas sp. SN2; WP_013785950.1 | 99 | |
| D104_10020 | mprchn1-13 | 1047 | RND transporter | Marinobacter sp. CP1; WP_053115257.1 | 54 | |
| D104_10025 | mprchn1-14 | 3042 | Multidrug transporter | Alteromonas sp. SN2; WP_013785952.1 | 99 | |
| D104_10030 | mprchn1-15 | 615 | SAM-dependent methyltransferase | Nitrincola sp. A-D6; WP_036520790.1 | 72 | |
| D104_10035 | mprchn1-16 | 234 | Hypothetical protein | Nitrincola sp. A-D6; WP_052063520.1 | 88 | |
| D104_10040 | mprchn1-17 | 1305 | Transposase | Shewanella putrefaciens; WP_014611283.1 | 74 | |
| D104_10445 | mprchn1-18 | 1173 | Transposase | Alteromonas sp. SN2; WP_041452603.1 | 98 | |
| D104_10450 | mprchn1-19 | 696 | ATPase AAA | Vibrio cholerae; WP_000796550.1 | 99 | |
| D104_10455 | mprchn1-20 | 573 | Plasmid-related protein | Alteromonas macleodii; WP_061094531.1 | 96 | |
| HS-2 (traA-s054) | D104_10490 | mprchn1-21 | 834 | Hypothetical protein | Vibrio nigripulchritudo; WP_022609808.1 | 99 |
| D104_10495 | mprchn1-22 | 702 | Hypothetical protein | Vibrio cholerae; WP_053044234.1 | 99 | |
| D104_10500 | mprchn1-23 | 408 | MerR family transcriptional regulator | Serratia marcescens; YP_003602521.1 | 100 | |
| D104_10505 | mprchn1-24 | 885 | Sodium: proton antiporter, CzcD | Pseudoalteromonas shioyasakiensis; WP_063529117.1 | 99 | |
| HS-4 (s073-traF) | D104_04195 | mprchn1-25 | 434 | Hypothetical protein | Vibrio alginolyticus; WP_005396849.1 | 97 |
| D104_04190 | mprchn1-26 | 663 | Hypothetical protein | Vibrio alginolyticus; WP_005396850.1 | 100 |
N.h, No homology.