Table 3.
Nucleotide | Sequence identification (NCBI) | VvSBT group | Chromosomal location | selection | Signal peptide prediction, signalP 4.1 (position) | N-glycosylation prediction (Asn-X-Ser/Thr), NetNGlyc 1.0 Server (position and sequence) | Subcellular location prediction |
---|---|---|---|---|---|---|---|
XM_002273159.3 | Subtilisin-like protease SBT3.5 | VvSBT3 | 16 | Similarity to AtSBT3.3 | YES (1–27) | YES | Extracellular region |
(184 NAT) | |||||||
(212 NTT) | |||||||
(373 NRT) | |||||||
(385 NHT) | |||||||
(412 NDT) | |||||||
(646 NNS) | |||||||
(682 NST) | |||||||
(689 NVT) | |||||||
(697 NST) | |||||||
XM_002275345.2 | Subtilisin-like protease SDD1 | VvSBT5 | 2 | Similarity to P69C | NO | YES * | Apoplast; Plant-type cell wall |
(15 NGT) | |||||||
(259 NCS) | |||||||
(314 NVS) | |||||||
(951 NDT) | |||||||
XM_002275374.2 | Subtilisin-like protease SDD1 | VvSBT5 | 2 | Similarity to P69C | YES (1–31) | YES | Apoplast; Plant-type cell wall |
(137 NRS) | |||||||
(186 NGT) | |||||||
(366 NFS) | |||||||
(382 NQT) | |||||||
(526 NVT) | |||||||
(644 NCS) | |||||||
XM_002275393.2 | Subtilisin-like protease | VvSBT5 | 2 | Similarity to P69C | YES (1–20) | YES | Apoplast; Plant-type cell wall |
(306 NST) | |||||||
(510 NRT) | |||||||
(615 NDT) | |||||||
XM_002275435.2 | Uncharacterized protein LOC100242816 | VvSBT5 | 2 | Similarity to P69C | YES (1–31) | YES | Apoplast; Plant-type cell wall |
(254 NGT) | |||||||
(338 NGS) | |||||||
(398 NAS) | |||||||
(542 NDT) | |||||||
(656 NRT) | |||||||
(699 NSS) | |||||||
(1053 NTT) | |||||||
(1196 NST) | |||||||
XM_002277863.3 | Subtilisin-like protease | VvSBT5 | 7 | Rpv9 | YES (1–23) | YES | Apoplast; Plant-type cell wall |
(184 NFT) | |||||||
(216 NSS) | |||||||
(247 NGT) | |||||||
(298 NNS) | |||||||
(421 NAT) | |||||||
(460 NKS) | |||||||
(588 NDT) | |||||||
(614 NAT) | |||||||
(687 NYT) | |||||||
(719 NLT) | |||||||
XM_002278414.3 | Subtilisin-like protease SBT3.3 | VvSBT3 | 2 | Similarity to AtSBT3.3 | YES (1–35) | YES | Extracellular region |
(192 NST) | |||||||
(219 NIT) | |||||||
(424 NAT) | |||||||
(642 NIS) | |||||||
(734 NLT) | |||||||
XM_002284065.3 | Subtilisin-like protease | VvSBT5 | 7 | Rpv9 | YES (1–24) | YES | Extracellular region |
(172 NFT) | |||||||
(378 NAS) | |||||||
(633 NYS) | |||||||
XM_003634104.2 | Subtilisin-like protease SBT3.5 | VvSBT3 | 16 | Similarity to AtSBT3.3 | YES (1–27) | YES | |
(184 NAT) | |||||||
(212 NTT) | |||||||
(373 NRT) | |||||||
(385 NHT) | |||||||
(412 NDT) | |||||||
(646 NNS) | |||||||
(682 NST) | |||||||
(689 NVT) | |||||||
(697 NST) | |||||||
XM_003634105.2 | Subtilisin-like protease SBT3.5 | VvSBT3 | 16 | Similarity to AtSBT3.3 | YES (1–27) | YES | Extracellular region |
(184 NAT) | |||||||
(212 NTT) | |||||||
(373 NRT) | |||||||
(385 NLT) | |||||||
(412 NDT) | |||||||
(646 NNS) | |||||||
(682 NST) | |||||||
(689 NVT) | |||||||
(697 NST) | |||||||
(722 NST) | |||||||
XM_010649370.1 | Subtilisin-like protease SBT3.5 | VvSBT3 | 3 | Similarity to AtSBT3.3 | YES (1–27) | YES | Extracellular region |
(179 NRS) | |||||||
(362 NQT) | |||||||
(407 NAT) | |||||||
(651 NTT) | |||||||
XM_010659200.1 | Subtilisin-like protease SBT5.3 isoform X2 | VvSBT4 | 12 | Located within Rpv1 + Rpv13 | NO | YES * | |
(60 NSS) | |||||||
(95 NGT) | |||||||
(155 NDS) | |||||||
(245 NAS) | |||||||
(318 NFT) | |||||||
(330 NST) | |||||||
(455 NAS) | |||||||
(500 NQT) | |||||||
XM_010660203.1 | Cucumisin isoform X1 | VvSBT1 | 13 | (Figueiredo et al., 2008, 2012; Monteiro et al., 2013) | YES (1–29) | YES | Extracellular region |
(180 NFT) | |||||||
(387 NRS) | |||||||
(460 NST) | |||||||
(640 NGT) | |||||||
(666 NRT) | |||||||
XM_010663620.1 | Subtilisin-like protease SBT3.5 | VvSBT3 | 2 | Similarity to AtSBT3.3 | YES (1–36) | YES | Extracellular region |
(188 NST) | |||||||
(216 NTS) | |||||||
(247 NVS) | |||||||
(377 NKT) | |||||||
(925 NTT) | |||||||
(956 NAS) | |||||||
(1086 NVT) |
Asterisk (
) indicates sequences that may not contain a signal peptide.