Table 4.
S. N. | Sub family | TFs | Core sequence/TFBS | Primary metabolism genes | Specialized metabolism genes | References |
---|---|---|---|---|---|---|
1 | DREB (ERF subfamily) | DREB1/CBF, DREB2A, DREB1D, ORCA1 | A/GCCGAC | COR15a, COR78, esk1, LEA, CAB, AS, DXS | STR, TDC, D4H, CPR | Xin and Browse, 2000; Agarwal et al., 2006; Sakuma et al., 2006; Lata and Prasad, 2011; Licausi et al., 2013; Yamada and Sato, 2013 |
2 | ERF | ERF-I-V, ORCA2, ERF221, EIN3, CRF, RAP2.6, RAP2.12, RAP2.2 | AGCCGCC | AOX, PDC, ADH1 | DcPAL3, PMT, QPT, ODC, QS, MPO | Kimura et al., 2008; Yamada and Sato, 2013 |
3 | RAV | RAV1, RAV3, TEM1 | CAACA | Em genes (Em1 and Em6), LEA, AS | GST, LOX, SamDC | Woo et al., 2010; Licausi et al., 2013; Feng et al., 2014; Moran Lauter et al., 2014 |
esk1, eskimo1 gene; CAB, Chlorophyll a/b-binding protein; AS, Anthranilate synthase; DXS, D-1-deoxyxylulose 5-phosphate synthase; STR, Strictosidine synthase; TDC, tryptophan decarboxylase; D4H, desacetoxyvindoline 4-hydroxylase; CPR, cytochrome P450 reductase; PMT, putrescine N-methyltransferase; QPT, quinolinate phosphoribosyltransferase; AOX, aspartate oxidase; ODC, ornithine decarboxylase; QS, quinolinic acid synthase; MPO, N-methylputrescine oxidase; PDC, Pyruvate decarboxylase.