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. 2016 Nov 11;17(Suppl 10):785. doi: 10.1186/s12864-016-3104-5

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© The Author(s) 2016

Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver(http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 3 — Topological accuracy of LD-based and breakpoint-based methods on model conditions with recombination hotspots. The number of recombination hotspots and the hotspot length distribution were chosen using either a deterministic or non-deterministic approach (see Methods). Results for 8 taxon simulations using the deterministic approach are shown in panel (i) on the left, and results for 8 taxon simulations using the non-deterministic approach are shown in panel (ii) on the right. Averages and standard error bars are shown (n=20)