Table 1.
Gene | Comment | OR | p | Pairwise p | Accession | Reference |
---|---|---|---|---|---|---|
cfr | cfr-family 23S ribosomal methyltransferase | 18 | 0.0089 | 0.0156 - 0.1093 | AGJ70604 | [33] |
pinE | DNA recombinase (pLRSA417-associated) | Inf | 0.0038 | 0.03125 - 0.03125 | EXP54287 | [34] |
cueR | HTH-type transcriptional regulator | Inf | 0.0123 | 0.03125 - 0.03125 | AJM87290 | [34] |
Mergeda | Presumed plasmid genes | Inf | 0.0123 | 0.0625 - 0.0625 | - | - |
blaR1 | Beta-lactamase regulatory protein | 0.067 | 0.0237 | 0.0625 - 0.3125 | WP_001096374 | [35] |
Hypo. | Hypothetical protein | Inf | 0.0350 | 0.0625 - 0.0625 | - | - |
P values < = 0.05 in italics
aYolD-like protein, TrbC/VIRB2-family protein, seven hypothetical proteins
OR odds ratio, p naïve p value, Pairwise p range of p values from the pairwise comparisons, Emp p empirical p value after 1000 permutations