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. 2016 Nov 14;2016:4503840. doi: 10.1155/2016/4503840

Table 1.

The 18 circRNAs expressed in at least one DCIS and IDC sample were listed. The genomic information and the chromosomal coordinate were related to the reference genome human hg19 (GRCh37). Ensemble isoform transcript id names were reported.

Chromosomal location circBASE number Length Strand Exon count Exon sizes Gene name Isoform name
chr2: 232325188–232325275 0001111, alias 001797 87 1 87 NCL ENST00000322723.4
chr2: 99976698–99988193 NA 11495 + 8 126, 85, 673, 218, 151, 99, 90, 75 EIF5B ENST00000289371.6
chr3: 169694733–169703653 0122662 8920 + 4 106, 205, 93, 61 SEC62 ENST00000337002.4
chr3: 169694733–169706147 0001358, alias 001803 11414 + 5 106, 205, 93, 61, 120 SEC62 ENST00000337002.4
chr5: 179146668–179146782 0075303 114 + 1 114 CANX ENST00000504734.1
chr5: 81572220–81572269 NA 49 1 49 RPS23 ENST00000510019.1
chr6: 128718710–128718833 0077818 123 1 123 PTPRK ENST00000368226.4
chr7: 11021998–11030474 0133015 8476 + 2 788, 145 PHF14 ENST00000403050.3
chr9: 5968018–5988545 0138872 20527 2 1, 418, 201 KIAA2026 ENST00000399933.3
chr10: 112360196–112360304 NA 108 + 1 108 SMC3 ENST00000361804.4
chr11: 64888971–64889011 NA 40 1 40 FAU ENST00000525297.1
chr11: 70266505–70266616 0023341 111 + 1 111 CTTN ENST00000346329.3
chr14: 105235723–105235829 NA 106 + 1 106 RP11-982M15.2 ENST00000557223.1
chr15: 42807434–42807552 NA 118 + 1 118 SNAP23 ENST00000249647.3
chr17: 48271709–48271808 NA 99 1 99 COL1A1 ENST00000225964.5
chr19: 50358226–50361371 0051970 3145 + 5 108, 156, 90, 74, 58 PTOV1 ENST00000600603.1
chr19: 9938619–9938687 NA 68 + 1 68 UBL5 ENST00000590068.1
chr20: 25252018–25252122 NA 104 + 1 104 PYGB ENST00000216962.4

NA = not available.