Table 1. Genes carrying the carbapenem-associated genetic variations.
Locus tag* | Description |
---|---|
ACICU_02910 | putative surface adhesin protein |
ACICU_00262 | homoserine dehydrogenase |
ACICU_00264 | site-specific recombinase XerD |
ACICU_00272 | predicted phosphohydrolase |
ACICU_00865 | hypothetical protein |
ACICU_01307 | ATPase with chaperone activity, ATP-binding subunit |
ACICU_01366 | purine-cytosine permease |
ACICU_01449 | dehydrogenase with different specificities |
ACICU_02301 | ethanolamine ammonia-lyase, small subunit |
ACICU_02437 | gamma-aminobutyrate permease |
ACICU_02439 | adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
BL01_01510 | rph, ribonuclease PH |
ABTJ_03740 | alpha-hydroxyacid dehydrogenase, FMN-dependent l-lactate dehydrogenase |
ABTJ_02588 | hypothetical protein |
ABTJ_02897 | hypothetical protein |
All of the variations are nonsynonymous compared to the susceptible genome ATCC17978. Locus tags are shown for the genes of the carbapenem-resistant strains (ACICU, AC29, and MDR-TJ) onto which the kmers were mapped.