Skip to main content
. 2016 Nov 28;6:37392. doi: 10.1038/srep37392

Table 3. Comparison of variants allele frequency (VAF) for mutations in CTCs detected by targeted sequencing (VAF 1) and digital PCR (VAF 2).

Patient # Gene Genomic Position Ref/Alt VAF 1 (%) VAF2 (%)
20 EGFR Chr7_55259599 G873R 3.9 0.0
ATM Chr11_108236062 Q3000* 4.3 N.A.a
TP53 Chr17_7578260 V179M 7.6 7.5
SMAD4 Chr18_48584594 Q256L 4.5 0.0
22 EGFR Chr7_55249081 M793I 20.0 17.8
24 MET Chr7_116411923 R988C 7.5 7.2
FGFR2 Chr10_123274803 S372F 3.3 2.6
27 FGFR2 Chr10_123279539 G298D 5.1 4.5
32 FGFR3 Chr4_1806270 R399C 6.1 1.7b
TP53 Chr17_7579442 P82L 4.7 4.1
36 ALK Chr2_29443646 P1191S 12.2 12.1

aData not available because a TaqMan probe for this mutation was not prepared.

bMutation also detected in matched WBCs.