Table 5. List of transcription factor-binding (TF) sites around the NCAPG-LCORL locus.
| Significant SNP | Site (Length) | Position1 (bp) | Occurrence | Exp. Value2 | Significance Level3 | Distance4 (bp) |
|---|---|---|---|---|---|---|
| rs110406669 | Zp2-Ebox (14) | −34345 | 1 | 3.81 × 10−4 | * | 3627 |
| Fkh/HNF-3-subcl’ (15) | −31870 | 1 | 2.82 × 10−4 | * | 1152 | |
| Nmp4-COL1A1-sit’ (20) | −30848 | 1 | 1.31 × 10−7 | *** | 130 | |
| flk1-HBE’ (14) | −29997 | 1 | 3.81 × 10−4 | * | 721 | |
| CTF/NF1-CF1-2 (11) | −27444 | 1 | 5.67 × 10−4 | * | 3274 | |
| delta-globin-PY (10)/pyr factor site (10) | −25949 | 1 | 7.50 × 10−4 | * | 4769 | |
| gamma-globin-he’ (13) | −25836 | 1 | 4.65 × 10−4 | * | 4882 | |
| rs110058857 and rs110058857 | Sp1-U2snR.2 (11) | +6963 | 1 | 5.67 × 10−4 | * | 4892 |
| PRDI_(1)’ (14) | +7799 | 1 | 3.81 × 10−4 | * | 4056 | |
| Elf-1-FCER1A’ (11) | +7828 | 1 | 5.67 × 10−4 | * | 4027 | |
| mTH-Pitx3-site- (14) | +9508 | 1 | 3.81 × 10−4 | * | 2347 | |
| CBF-CYP2E1 (14) | +10839 | 1 | 3.81 × 10−4 | * | 1016 | |
| AT2-VIRE (16) | +11677 | 1 | 2.71 × 10−5 | *** | 178 | |
| C/EBP-IL-8-1 (14) | +11954 | 1 | 3.81 × 10−4 | * | 99 | |
| IgHC.11′ (12) | +14748 | 1 | 1.42 × 10−4 | * | 2893 | |
| SV40.10(11)/SV40.4(11) | +15055 | 2 | 5.67 × 10−4 | * | 3200 |
Note: 1“Position” indicates distance (in nucleotides) relative to the beginning of XM_005207785; negative indicates upstream of XM_015471561. 2Experience Value. 3Significance level is represented by an asterisk (*), where *indicates 10−4 < P-Value < 10−3, and ***indicates P-Value < 10−4. 4Distance between TF and significant SNPs.