Skip to main content
. 2016 Nov 29;6:38179. doi: 10.1038/srep38179

Table 3. Primers and probes used for the detection and quantification by vitality qPCR.

STRAIN   Primer/Probe (5′-3′) Fragment length
Aggregatibacter actinomycetemcomitans Forward GAA CCT TAC CTA CTC TTG ACA TCC GAA 80 bp
Reverse TGC AGC ACC TGT CTC AAA GC
Probe AGA ACT CAG AGA TGG GTT TGT GCC TTA GGG
Fusobacterium nucleatum Forward GGA TTT ATT GGG CGT AAA GC 162 bp
Reverse GGC ATT CCT ACA AAT ATC TAC GAA
Probe CTC TAC ACT TGT AGT TCC G
Porphyromonas gingivalis Forward GCG CTC AAC GTT CAG CC 68 bp
Reverse CAC GAA TTC CGC CTG C
Probe CAC TGA ACT CAA GCC CGG CAG TTT CAA
Prevotella intermedia Forward CGG TCT GTT AAG CGT GTT GTG 99 bp
Reverse CAC CAT GAA TTC CGC ATA CG
Probe TGG CGG ACT TGA GTG CAC GC
Streptococcus mutans Forward GCC TAC AGC TCA GAG ATG CTA TTC T 114 bp
Reverse GCC ATA CAC CAC TCA TGA ATT GA
Probe TGG AAA TGA CGG TCG CCG TTA TGA A
Streptococcus sobrinus Forward TTC AAA GCC AAG ACC AAG CTA GT 88 bp
Reverse CCA GCC TGA GAT TCA GCT TGT
Probe CCT GCT CCA GCG ACA AAG GCA GC
Actinomyces naeslundii Forward TCG AAA CTC AGC AAG TAG CCG 96 bp
Reverse AGA GGA GGG CCA CAA AAG AAA
Probe GGG TAC TCT AGT CCA AAC TGG CGG ATA GCG
Streptococcus gordonii Forward CGG ATG ATG CTA ATC AAG TGA CC 177 bp
Reverse GTT AGC TGT TGG ATT GGT TGC C
Probe AGA ACA GTC CGC TGT TCA GAG CAA
Actinomyces viscosus Forward GTG AAG GAG CCA GCT TGC TGG TTC TG 155 bp
Reverse CGG AAC AAA CCT TTC CCA GGC
Probe ATG AGT GGC GAA CGG GTG AGT AAC
Streptococcus salivarius Forward AAC GTT GAC CTT ACG CTA GC 192 bp
Reverse ACC GTA ACG TGG GAA AAC TG
Probe GTA GCG TCA GAG TGG TTG AC
Streptococcus oralis Forward ACC AGC AGA TAC GAA AGA AGC AT 229 bp
Reverse AGG TTC GGG CAA GCG ATC TTT CT
Probe AAG GCT GCT GTT GCT GAA GAA GT
Streptococcus mitis Forward GGC TCG TAG TCT GGA GAT GG 133 bp
Reverse TAG GTC GTC GTC CCA AGG AA
Probe CGA AGA GCA CCA ATA GCA CCT CCC
Streptococcus sanguinis Forward CAA AAT TGT TGC AAA TCC AAA GG 75 bp
Reverse GCT ATC GCT CCC TGT CTT TGA
Probe AAA GAA AGA TCG CTT GCC AGA ACC GG
Veillonella parvula Forward GAC GAA AGT CTG ACG GAG CA 171 bp
Reverse TGC CAC CTA CGT ATT ACC GC
Probe AGC TCT GTT AAT CGG GAC GAA AGG C