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. 2016 Nov 30;7:1907. doi: 10.3389/fmicb.2016.01907

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Copyright © 2016 Satharasinghe, Murulitharan, Tan, Yeap, Munir, Ideris and Omar.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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The maximum likelihood phylogenetic trees constructed by using 5 Malaysian NDV isolates. (A) The phylogenetic tree based on nucleotide sequence of complete genome compared with 38 representative complete genomes of lineage 1–5 belongs to APMV-1. (B) The phylogenetic trees based on amino acids sequence of NP, P, M, F, HN, and L proteins compared with 38 representative protein sequence of lineage 1–5 belongs to APMV-1. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. Evolutionary analyses were conducted in MEGA6. Malaysian isolates MB128/04, MB076/05, IBS002/11, and IBS005/11 presented in this study are marked with a triangle (Δ) and IBS025/13 with a circle (◦).