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. 2016 Dec;196(3):394–406. doi: 10.1016/j.jsb.2016.09.003

Table 10.

The mean and standard deviation of the interaction energy for individual cooperatively hydrated interactions in the native and extended states for the CHARMM22/TIP3P/NaCl treatment, plus the energy difference. In each case, the donor or acceptor atoms are reported, using residue names, residue numbers, and CHARMM atom names.

Atom 1 Atom 2 Persistence Native ECH (kcal/mol) Extended ECH (kcal/mol) ΔECH (kcal/mol)
LEU42 O ARG55 HH11/HH21 0.63 ± 0.25 −67.22 ± 0.38 −68.4 ± 0.4 1.2
ASP44 HN ASP44 OD1/OD2 0.58 ± 0.14 −34.01 ± 0.31 −31.3 ± 0.3 −2.7
LYS48 O ALA49 O 0.64 ± 0.08 3.88 ± 0.30 3.9 ± 0.2 −0.1
ALA49 O VAL50 O 0.92 ± 0.08 0.95 ± 0.22 0.8 ± 0.2 0.1
VAL50 O LYS73 HZ1/HZ2/HZ3 0.85 ± 0.11 −5.18 ± 0.24 −5.3 ± 0.2 0.1
ALA59 O LEU61 O 0.89 ± 0.05 17.08 ± 0.25 16.4 ± 0.2 0.7
ALA59 O GLN66 HE21 0.87 ± 0.08 −16.43 ± 0.30 −16.9 ± 0.2 0.5
GLN66 OE1 LYS70 HZ1/HZ2/HZ3 0.68 ± 0.13 −31.91 ± 0.20 −31.2 ± 0.2 −0.7
LYS71 O GLU72 O 0.62 ± 0.06 1.68 ± 0.20 0.9 ± 0.2 0.7
GLY74 O PHE76 OT1/OT2 0.69 ± 0.14 −28.51 ± 0.38 −27.8 ± 0.3 −0.7
LEU75 O PHE76 OT1/OT2 0.85 ± 0.10 −20.31 ± 0.33 −20.5 ± 0.3 0.2
ASP44 OD1/OD2 ARG55 HN 0.51 ± 0.20 −29.87 ± 0.26 −29.0 ± 0.4 −0.9
ASP44 OD1/OD2 SER56 HN 0.86 ± 0.16 −22.47 ± 0.23 −22.2 ± 0.4 −0.3
GLU72 OE1/OE2 LYS73 HZ1/HZ2/HZ3 0.61 ± 0.20 −23.59 ± 0.30 −23.2 ± 0.3 −0.4
GLU45 OE1/OE2 LYS48 HZ1/HZ2/HZ3 0.69 ± 0.31 −23.93 ± 0.72 −23.2 ± 0.3 −0.7
Mean −18.7 −18.5 −0.2