Table 1. Common genes in comparison between 30% vs 50% DO and 30% vs 0%DO.
| Gene symbol | 30% vs 50%a | 30% vs 0%b | product | Notec | |
|---|---|---|---|---|---|
| NCgl0910 | 1.66824 | 1.313594 | hypothetical protein | similar to ABC-type multidrug transport system | |
| NCgl2113 | -1.5 | -2.8675 | hypothetical protein | - | |
| NCg0933 | 1.954 | -2.293 | hypothetical protein | GO:0046872//metal ion binding | |
| NCgl0712 | -1.286 | -2.119 | hypothetical protein | - | |
| NCgl2247 | 1.381 | 1.81 | malate synthase G | catalyzes the formation of malate from glyoxylate and acetyl-CoA | |
| NCgl0909 | 2.072 | 2.379 | ABC transporter ATPase | similar to ABC-type multidrug transport system; | |
| NCgl0334 | -1.003 | -1.73 | hypothetical protein; | K03646//colicin import membrane protein | |
| NCgl2134 | 1.432 | 2.728 | hypothetical protein; | - | |
| NCgl1171 | -1.34 | -2.615 | hypothetical protein; | - | |
| NCgl2512 | -1.14 | -1.931 | diadenosine tetraphosphate (Ap4A) hydrolase; | similar to other HIT family hydrolases; | |
| NCgl2411 | -1.12 | -2.458 | metalloendopeptidase-like protein; | K08259//lysostaphin [EC:3.4.24.75];K01417//[EC:3.4.24.-];K06194//lipoprotein NlpD | |
a 30% vs 50%, means the Log2Ratio(50%DO/30%DO). 50%DO, the RPKM value of the gene under 50% DO concentration; 30%DO, the RPKM value of the gene under intermediate DO concentration.
b 30% vs 0%, means the Log2Ratio(0%DO/30%DO). 0%DO, the RPKM value of the gene under 0% DO concentration; 30%DO, the RPKM value of the gene under intermediate DO concentration.
c Note, the GO number or KEGG pathway number or functional description.