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. 2016 Dec 2;7:1778. doi: 10.3389/fpls.2016.01778

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Copyright © 2016 Jourda, Cardi, Gibert, Giraldo Toro, Ricci, Mbéguié-A-Mbéguié and Yahiaoui.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Phylogenetic analysis of the BAM family. The maximum likelihood tree of BAM predicted proteins was rooted on midpoint. BAMI and BAMIV sequences are collapsed from the original tree (Supplementary Figure S3). Supports > 0.70 (aLRT statistics with SH–like procedure) are indicated. Physcomitrella patens (Pp), grapevine (GSVIV), tomato (Solyc), potato (PGSC), woodland strawberry (Fv), Arabidopsis (At), peach (Ppa), Brachypodium (Bradi), rice (Os), maize (GRMZM), sorghum (Sb), date palm (DP) and banana (GSMUA) identifiers are indicated (in brown for banana). Branches are colored according to gene duplication modes: WGD (blue) and unknown (gray). Black branches correspond to speciation events. WGD events identified using reconstructed ancestral blocks are indicated (blue letters). The scale bar corresponds to estimated amino acid substitutions per site. Sequences were grouped using the tree topology and a previous classification (Fulton et al., 2008).