Table 1.
Overall type I error rates
| Response variable | Explanatory variable | Regression model | # p values | # Nonmissing p values | % Nonmissing p values | % Nonmissing p values under 0.05 |
|---|---|---|---|---|---|---|
| AAC | Adjusted DBP | Negative binomial (NB) | 8957 | 8871 | 99.0 | 0.388 |
| Zero-inflated NB | 8957 | 6608 | 73.8 | 0.064 | ||
| Hurdle NB | 8957 | 6585 | 73.5 | 0.035 | ||
| AAC/total read depth | Adjusted DBP | Standard linear | 8957 | 8947 | 99.9 | 0.062 |
| Robust linear | 8957 | 1509 | 16.8 | 0.068 | ||
| Adjusted DBP | AAC/total read depth | Standard linear | 8957 | 8947 | 99.9 | 0.062 |
| Robust linear | 8957 | 8917 | 99.6 | 0.127 |