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. 2016 Oct 18;10(Suppl 7):289–294. doi: 10.1186/s12919-016-0045-6

Table 2.

Results of the SNVs with the smallest p values in the association tests of H 0 : β 1 = 0 for GE under the copula and univariate models

SNV MAF Location Copula Univariate
β1^ (SE) p value Adj. p value β1^ (SE) p value Adj. p value
rs2314667 0.32 UBA52 (upstream) 0.88 (5.42 × 10− 02) 6.47 × 10− 60 1.71 × 10− 55 0.88 (5.49 × 10− 02) 3.21 × 10− 26 8.71 × 10− 22
rs2314664 0.33 UBA52 (downstream) 0.85 (5.52 × 10− 02) 5.01 × 10− 54 7.97 × 10− 50 0.85 (5.59 × 10− 02) 7.24 × 10− 25 1.18 × 10− 20
rs2314666 0.34 UBA52 (downstream) 0.85 (5.66 × 10− 02) 2.88 × 10− 51 3.81 × 10− 47 0.85 (5.73 × 10− 02) 3.41 × 10− 24 4.62 × 10− 20

Adj. p value is the adjusted p value with BH-correction; MAF denotes the minor allele frequency in this sample. The estimated Kendall’s τ between SBP adj and GE UBA52,adj is − 0.01. Note: The markers in the table are in very high linkage disequilibrium (LD) (with 0.96 ≤ r ≤ 0.99). SNVs rs6554 and rs10425018 in the same gene are in perfect LD with rs2314667 and have identical association; also rs7258480 is in perfect LD with rs2314664