Table 2. Metabolites tentatively identified by MS/MS with significant different levels in urine from PCa versus that of negative biopsy patients.
Pathway | Compound name | RT (min) | m/z | Adduct | Formula | Fragments | p-Value | p-Value (corrected) | Fold change (Controls vs. PCa) | Regulation in cancer |
---|---|---|---|---|---|---|---|---|---|---|
Lysine degradation | Dimethyllysine*** | 1.05 | 175.14409 | M + H | C8H18N2O2 | 84.0815/130.0878 | 1.01E-06 | 1.70E-04 | 1.74 | ↓ |
5-acetamidovalerate*** | 1.73 | 160.0968 | M + H | C7H13NO3 | 142.0862/70.0655/98.0623 | 1.19E-03 | 2.56E-02 | 1.51 | ↓ | |
Acetyllysine** | 1.48 | 189.1230 | M + H | C8H16N2O3 | 84.0811/126.0914 | 6.19E-05 | 2.53E-03 | 1.33 | ↓ | |
Trimethyllysine** | 1.05 | 189.16005 | M + H | C9H20N2O2 | 130.0861/84.0805/60.0806 | 8.22E-04 | 1.31E-02 | 1.28 | ↓ | |
Histidine metabolism | Imidazole lactate** | 1.18 | 157.0607 | M + H | C6H8N2O3 | 111.0550/83.0610 | 5.64E-06 | 3.89E-04 | 1.46 | ↓ |
Histidine** | 1.05 | 156.07684 | M + H | C6H9N3O2 | 110.0718/83.0625/95.0600 | 1.69E-06 | 6.02E-03 | 1.43 | ↓ | |
Methylhistidine** | 1.06 | 170.09247 | M + H | C7H11N3O2 | 124.0864/109.0756/96.0679/83.0600/68.0493 | 1.64E-03 | 2.33E-02 | 1.40 | ↓ | |
Acetylhistidine** | 1.28 | 198.0874 | M + H | C8H11N3O3 | 152.0817/110.0717/180.3059 | 5.84E-03 | 4.24E-02 | 1.26 | ↓ | |
Arginine metabolism | Urea** | 1.24 | 61.0399 | M + H | CH4N2O | 44.0133 | 8.39E-03 | 1.89E-02 | 1.37 | ↓ |
Acetylarginine** | 1.67 | 215.11621 | M-H | C8H16N4O3 | 173.1032/129.1063 | 2.35E-03 | 2.58E-02 | 1.34 | ↓ | |
Acetylcitrulline** | 2.52 | 216.0990 | M-H | C8H15N3O4 | 173.0931/131.0821 | 3.35E-02 | 3.75E-02 | 1.29 | ↓ | |
Acetylputrescine** | 1.25 | 131.1178 | M + H | C6H14N2O | 72.0809/114.0907 | 5.28E-03 | 4.19E-02 | 1.30 | ↓ | |
Dimethylarginine** | 1.17 | 203.15036 | M + H | C8H18N4O2 | 70.0653/116.0698/158.1285/88.0874 | 3.89E-03 | 3.58E-02 | 1.25 | ↓ | |
Citrulline* | 1.34 | 176.10316 | M + H | C6H13N3O3 | 159.0764/130.0975/70.0651 | 8.09E-03 | 4.90E-02 | 1.23 | ↓ | |
Tyrosine metabolism | Tyrosine** | 2.96 | 180.0660 | M-H | C9H11NO3 | 119.0503/163.0404/136.0759/93.0318 | 2.44E-03 | 2.58E-02 | 1.34 | ↓ |
Tryptophan metabolism | 8-methoxykynurenate** | 7.79 | 220.0610 | M + H | C11H9NO4 | 174.0554/116.9734/202.0484 | 1.39E-02 | 2.27E-02 | 1.31 | ↓ |
Kynurenic acid** | 7.00 | 188.0352 | M-H | C10H7NO3 | 144.0454 | 6.21E-04 | 1.31E-02 | 1.30 | ↓ | |
Xanthurenic acid* | 6.80 | 206.0450 | M + H | C10H7NO4 | 188.0345/160.0386/132.0459 | 9.79E-03 | 1.92E-02 | 1.22 | ↓ | |
Taurine metabolism | Sulfoacetate** | 1.25 | 138.9708 | M-H | C2H4O5S | 94.9810/79.9575 | 1.56E-03 | 2.26E-02 | 1.28 | ↓ |
Isethionate* | 1.23 | 124.9916 | M-H | C2H6O4S | 79.9572/94.985/106.9797 | 6.71E-03 | 4.24E-02 | 1.19 | ↓ | |
Acetyltaurine* | 1.56 | 166.0194 | M-H | C4H9NO4S | 79.9579/124.0078 | 1.63E-02 | 2.27E-02 | 1.12 | ↓ | |
Alanine, aspartate and glutamate metabolism | Acetylaspartylglutamic acid* | 2.81 | 303.0833 | M-H | C11H16N2O8 | 96.0077/128.0350 | 5.21E-03 | 4.19E-02 | 1.24 | ↓ |
Acetylaspartate* | 1.86 | 174.0410 | M-H | C6H9NO5 | 88.0403/130.0507/115.0037/58.0296 | 5.96E-03 | 4.19E-02 | 1.19 | ↓ | |
2-oxoglutaramate* | 1.49 | 144.03145 | M-H | C5H7NO4 | 126.0202/100.0409/82.0305/72.0454/41.9983 | 9.85E-04 | 1.31E-02 | 1.18 | ↓ | |
Glutamine and glutamate metabolism | 2-pyrrolidone-5-carboxylate** | 2.10 | 128.03542 | M-H | C5H7NO3 | 85.0295/41.0399/110.8772 | 8.21E-03 | 4.90E-02 | 1.25 | ↓ |
Purine and pyrimidine metabolism | 5-methyldeoxycytidine-5′-phosphate* | 2.81 | 320.0620 | M-H | C11H15NO10 | 110.0245/240.0523 | 1.88E-02 | 2.37E-02 | 1.21 | ↓ |
7-methylguanosine* | 5.31 | 296.100 | M-H | C11H15N5O5 | 164.0574 | 1.97E-02 | 2.37E-02 | 1.15 | ↓ | |
7-methylguanine** | 2.10 | 164.0580 | M + H | C6H7N5O | 149.0497/124.0501 | 2.64E-02 | 3.19E-02 | −1.30 | ↑ |
The compounds are grouped by the metabolism pathways in which they are preferentially involved and sorted by their fold change.
The fold change value ranges are indicated on the table by the following legend:
***fold change values from 1.5 to 1.75.
**fold change values from 1.25 to 1.5.
*fold change values from 1.1 to 1.25.