Table S1.
GSEA of hallmark pathways in Tg26 lymphomas
Name | Size* | NES | FDR q |
GSEA hallmark pathways: consistency with the most up-regulated genes | |||
E2F | 172 | 3.3005993 | 0 |
G2M CHECKPOINT | 176 | 3.2788227 | 0 |
MYC TARGETS V1 | 175 | 3.0990205 | 0 |
MYC TARGETS V2 | 48 | 2.3560371 | 0 |
DNA REPAIR | 134 | 2.2059152 | 0 |
MTORC1 SIGNALING | 178 | 2.1621082 | 0 |
MITOTIC SPINDLE | 180 | 2.0368228 | 0 |
UNFOLDED PROTEIN RESPONSE | 103 | 1.7171309 | 0.001916676 |
SPERMATOGENESIS | 123 | 1.6502607 | 0.003589697 |
GSEA Hallmark Pathways: consistency with the most down-regulated genes | |||
ALLOGRAFT REJECTION | 172 | −2.4777253 | 0 |
INFLAMMATORY RESPONSE | 184 | −2.393372 | 0 |
EPITHELIAL MESENCHYMAL TRANSITION | 187 | −2.326842 | 0 |
HALLMARK UV RESPONSE DN | 132 | −2.2021167 | 0 |
APICAL JUNCTION | 188 | −2.1883261 | 0 |
IL6 JAK STAT3 SIGNALING | 84 | −2.099998 | 0 |
IFN GAMMA RESPONSE | 172 | −2.0646842 | 1.80 × 10−4 |
TNFA SIGNALING VIA NFKB | 182 | −2.054592 | 1.57 × 10−4 |
ADIPOGENESIS | 183 | −1.9837885 | 3.62 × 10−4 |
IL2 STAT5 SIGNALING | 178 | −1.895978 | 7.39 × 10−4 |
COMPLEMENT | 170 | −1.776054 | 0.001883127 |
MYOGENESIS | 193 | −1.7416193 | 0.002376778 |
KRAS SIGNALING UP | 183 | −1.7353489 | 0.002540431 |
IFN ALPHA RESPONSE | 81 | −1.6767852 | 0.003450024 |
ANGIOGENESIS | 33 | −1.6052388 | 0.007246819 |
BILE ACID METABOLISM | 108 | −1.5792547 | 0.008601794 |
APICAL SURFACE | 42 | −1.5046679 | 0.015674971 |
HYPOXIA | 181 | −1.5025636 | 0.015196791 |
APOPTOSIS | 153 | −1.4934539 | 0.01546518 |
NES, normalized enrichment score.
Number of genes in gene set.