Table S2.
Primer | Description | Sequence, 5′–3′* |
5′-primer_80 | Forward amplification primer for all 5′-L samples | GGGATGTGCTGCAAGGCGATTAAGTTGGG |
R_TSL4nativeBlunt | Reverse amplification primer for 5′-L356 template | mUmACCGACGCTCTCGCACCCATCTCTC |
R_TSL4-344 | Reverse amplification primer for 5′-L344 and 5′-L344ΔPBS template | mCmGCACCCATCTCTCTCCTTCTAGCCTCC |
R_TmSL4-344-lrAID | Reverse amplification primer for 5′-L344-UUA lrAID and 5′-L344-UUG lrAID template | mCmGCACTTATCTCTCTCCTTCTAGCCTCCGC |
Top17 | T7 promoter | TAATACGACTCACTATA |
DIS_237-281 | Template for transcription of DIS237–281 RNA | mGmGCCCCTCGCCTCTTGCCGTGCGCGCTTCAGCAAGCCGAGTCCTGCCTATAGTGAGTCGTATTA |
U5-gaga-AUG-UUAlrAID | Template for transcription of U5:AUGUUA lrAID RNA | mGmGCGCACTTATCTTCTCAGATAAGCACACCTATAGTGAGTCGTATTA |
U5-gaga-AUG-UUGlrAID | Template for transcription of U5:AUGUUG lrAID RNA | mGmGCGCACTTATCTTCTCAGACAAGCACACCTATAGTGAGTCGTATTA |
m denotes the incorporation of 2′ O-methyl RNA bases.